Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq28392 132 4e-26 >seq28392 Length=124393 Score = 132 bits (146), Expect = 4e-26 Identities = 115/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || |||||||| |||| || ||||| ||||| ||||| || ||||| ||||||||||| Sbjct 6066 GGTTGCCAAGCCTTGTCGGAAATGATCCAGTTTTACCTGGAGGAGGTGATGCCACAGGCT 6007 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || ||||| || ||||| || || ||||| ||||||||||| || ||||||||||| Sbjct 6006 GAGAACCACGGCCCTGACATCAAGGAGCACGTGAATTCCCTGGGGGAGAAGCTGAAGACC 5947 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 | || || || ||||| ||||| Sbjct 5946 CTCAGGCTGCGGCTGCGGCGCTG 5924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425666503753448