Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq6048 183 5e-42 seq9962 179 6e-41 seq35553 154 2e-33 seq3313 150 3e-32 seq23862 132 8e-27 seq10717 131 3e-26 seq44051 113 7e-21 seq29519 109 9e-20 >seq6048 Length=345543 Score = 183 bits (202), Expect = 5e-42 Identities = 205/274 (75%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| |||| |||||| ||||||||||| || |||||||| || || || Sbjct 188214 CGCTAAGCGTCACCGCAAGGTTCTTCGCGATAACATCCAGGGCATCACCAAACCTGCCAT 188155 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||| |||| || ||||| ||||| |||||| | ||||| | ||||||| |||| Sbjct 188154 CCGTCGTTTGGCCCGGCGTGGAGGAGTTAAGCGTATTTCTGGCCTCATCTATGAGGAGAC 188095 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | ||||| | | ||| |||| || || || ||| ||||| Sbjct 188094 CCGCGGGGTGCTGAAGGTGTTCCTGGAAAACGTGATCCGCGACGCGGTCACCTACACCGA 188035 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || || || ||||||||| |||||||| | ||||| || ||||||| || || Sbjct 188034 GCATGCCAAGCGCAAAACTGTCACCGCCATGGATGTGGTCTACGCGCTGAAACGCCAGGG 187975 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 ||| | | || || ||||| ||||| || || Sbjct 187974 CCGCACTCTCTACGGCTTTGGCGGTTAAGCTGCT 187941 Score = 172 bits (190), Expect = 9e-39 Identities = 199/268 (74%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||| |||| | | || ||||||||||| || ||||| ||||| || || Sbjct 164189 CGCTAAGCGTCACCGCAAGGTTTTGCGCGATAACATCCAGGGCATCACAAAGCCGGCCAT 164130 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||| || ||||| ||||||||||| |||| || | |||| || |||| Sbjct 164129 CCGCCGCCTGGCCCGCCGTGGAGGAGTCAAGCGGATCTCCGGCCTCATCTACGAGGAGAC 164070 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | ||||| ||| ||| |||| || || || ||| ||||| Sbjct 164069 CCGCGGGGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGGGACGCGGTCACCTACACCGA 164010 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||||||| ||||||| | ||||| || | || ||||| || Sbjct 164009 GCACGCCAAGCGCAAGACTGTCACCGCCATGGACGTGGTCTACGCGCTCAAGCGTCAGGG 163950 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||| | | ||||| ||||| ||||| Sbjct 163949 CCGCACTCTCTATGGATTTGGTGGTTAA 163922 Score = 168 bits (186), Expect = 1e-37 Identities = 194/261 (74%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| ||||||| | | | || ||||||||||| || || || || |||||||| Sbjct 41421 CGCTAAGCGCCATCGCAAAGTTTTGCGGGATAACATCCAGGGTATTACTAAACCAGCTAT 41480 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||||||||| |||||||| ||||| ||| |||| || | |||| ||||||| Sbjct 41481 ACGGCGTCTGGCTCGGCGTGGTGGCGTCAAACGTATCTCCGGCCTTATCTACGAAGAGAC 41540 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| || |||| | || || | | || || | |||||| | ||| || || Sbjct 41541 TCGTGGGGTGCTGAAAGTGTTTCTGGAAAATGTGATTCGGGATGCTGTTACCTACACGGA 41600 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||| || ||||||| | ||||| || | |||||||| || Sbjct 41601 GCACGCCAAGCGCAAGACTGTTACAGCCATGGACGTGGTCTACGCGCTCAAACGTCAGGG 41660 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||| | |||| |||||||| Sbjct 41661 CCGCACCCTTTACGGTTTTGG 41681 Score = 149 bits (164), Expect = 1e-31 Identities = 189/260 (73%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||| || || | | ||| || ||||||||||| || ||||| ||||| ||||| Sbjct 116006 GCTAAGCGCCACCGTAAAGTTCTGCGCGATAACATCCAGGGCATCACTAAGCCCGCTATT 115947 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| |||| || ||||| || || || || | ||||| | ||||||| |||| | Sbjct 115946 CGTCGCTTGGCCCGCCGTGGGGGTGTTAAACGCATTTCTGGGCTCATCTATGAGGAGACT 115887 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | ||| | ||| ||| |||| || || || ||| |||||| Sbjct 115886 CGCGGGGTGCTGAAGGTTTTCTTGGAGAACGTGATCCGAGACGCGGTCACCTACACCGAG 115827 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || |||||||||||| ||||||| | ||||| || | || || || ||| Sbjct 115826 CACGCCAAGCGCAAGACTGTCACCGCCATGGACGTGGTCTACGCGCTCAAGCGCCAGGGC 115767 Query 16673 CGTAAGATTTATGGTTTTGG 16692 || | | || || ||||| Sbjct 115766 CGCACCCTCTACGGCTTTGG 115747 Score = 145 bits (160), Expect = 1e-30 Identities = 188/260 (72%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| || | ||| || |||||||| ||||| || || || || || ||| Sbjct 140041 GCGAAGCGTCACCGTAAGGTTCTGCGGGATAACATTCAAGGTATTACTAAACCCGCGATC 140100 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||| ||||||||||| |||||||||||||| ||||||| | | || || || | | Sbjct 140101 CGTCGCCTGGCTCGTCGCGGTGGAGTCAAGCGCATCTCTGGTCTTATTTACGAGGAAACT 140160 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || |||| | || | | | ||| || | || || || ||| ||||| Sbjct 140161 CGTGGGGTGCTGAAAGTGTTTTTGGAAAACGTGATTCGGGACGCCGTCACCTACACCGAA 140220 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || ||||| ||||| ||||||| ||||||| || |||| ||||| || Sbjct 140221 CACGCCAAGCGAAAGACGGTCACGGCCATGGACGTCGTCTACGCGCTGAAGCGTCAGGGA 140280 Query 16673 CGTAAGATTTATGGTTTTGG 16692 |||| |||| || ||||| Sbjct 140281 CGTACTCTTTACGGATTTGG 140300 Score = 122 bits (134), Expect = 1e-23 Identities = 173/243 (71%), Gaps = 3/243 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| ||||| | | | || || ||||||||||| || || || | ||||| Sbjct 158770 CGCCAAGCGCCATCGTAAGGTTTTACGGGACAACATCCAAGGTATTACAAAATCTGCTAT 158829 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| | |||||||||||| ||||| || || ||| | ||||| | |||| || || | Sbjct 158830 CCGCCTTCTGGCTCGTCGCGGTGGTGTAAAACGTATTTCTGGTCTCATCTACGAGGAAAC 158889 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | ||||| ||| ||| |||| || || || ||| ||||| Sbjct 158890 CCGCGGGGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGGGACGCGGTCACCTACACCGA 158949 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||| || || || ||| | |||||| |||||||| ||||| ||| | || || || | Sbjct 158950 GCATGCCAAGCGCAAGGCGGTCACCGCCATGGAT---GTCTACGCACTCAAGCGCCAGAG 159006 Query 16672 CCG 16674 ||| Sbjct 159007 CCG 159009 >seq9962 Length=93654 Score = 179 bits (198), Expect = 6e-41 Identities = 200/267 (75%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||||| || |||| ||| || || |||||||| |||||||||||||| || || Sbjct 87638 GCTAAGCGCCACCGCAAGGTTCTGCGCGACAACATCCAGGGAATCACCAAGCCTGCCATA 87697 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||||||||||||||||||||||| || ||||| ||||||| | ||||||| |||| Sbjct 87698 CGTCGTCTGGCTCGTCGTGGTGGTGTGAAGCGGATCTCTGGCCTCATCTATGAGGAGACC 87757 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | ||||| | | || |||| || || || ||| |||||| Sbjct 87758 CGCGGGGTGCTGAAGGTGTTCCTGGAAAATGTGATCCGGGACGCGGTCACCTACACCGAG 87817 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || || || ||||||||| ||||||| | ||||| ||| | || || || || Sbjct 87818 CACGCCAAGCGCAAAACTGTCACCGCCATGGACGTGGTCTACGCACTCAAGCGCCAGGGA 87877 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| |||| ||||| || ||||| Sbjct 87878 CGTACTCTTTACGGTTTCGGCGGTTAA 87904 >seq35553 Length=33913 Score = 154 bits (170), Expect = 2e-33 Identities = 180/243 (74%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| | ||||| ||||||||||| || ||||||||||| || || Sbjct 15396 CGCCAAGCGCCACCGCAAAGTCCTTCGGGATAACATCCAGGGCATCACCAAGCCCGCCAT 15455 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || ||||||||||| ||||| || ||||| |||| || | |||| || |||| Sbjct 15456 TCGGCGCCTGGCTCGTCGCGGTGGTGTAAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 15515 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| || ||||| | || || ||| ||| |||| || || || ||| || || Sbjct 15516 TCGTGGGGTGCTGAAGGTGTTTCTGGAGAACGTGATCCGGGACGCGGTCACCTACACTGA 15575 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| | |||||| | ||||| || | ||||| || || Sbjct 15576 GCACGCCAAGCGGAAGACGGTCACTGCTATGGATGTGGTCTACGCTCTCAAACGCCAGGG 15635 Query 16672 CCG 16674 ||| Sbjct 15636 CCG 15638 Score = 154 bits (170), Expect = 2e-33 Identities = 180/243 (74%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||| ||||| || |||| | |||||| ||||||||||| || ||||| ||||| || || Sbjct 25022 CGCCAAGCGCCACCGCAAAGTTCTTCGCGATAACATCCAGGGCATCACGAAGCCCGCCAT 24963 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || || ||||||||||| ||||| || ||||| | || || | |||| || |||| Sbjct 24962 TCGGCGCCTGGCTCGTCGCGGTGGTGTGAAGCGCATTTCCGGCCTCATCTACGAGGAGAC 24903 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | || || ||| ||| |||| || || || ||| ||||| Sbjct 24902 CCGCGGGGTGCTGAAGGTGTTTCTGGAGAACGTGATCCGGGACGCGGTCACCTACACCGA 24843 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||||||| ||||||| | ||||| ||| | || || || || Sbjct 24842 GCACGCCAAGCGCAAGACTGTCACCGCCATGGACGTGGTCTACGCACTCAAGCGCCAGGG 24783 Query 16672 CCG 16674 ||| Sbjct 24782 CCG 24780 >seq3313 Length=195015 Score = 150 bits (166), Expect = 3e-32 Identities = 190/261 (73%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || |||| ||| || || || ||||| || || || ||||| || || Sbjct 19160 CGCTAAGCGCCACCGCAAGGTTCTGCGTGACAATATCCAGGGTATTACTAAGCCCGCCAT 19219 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||| ||||||||||| ||||| || ||||| |||| || | |||| || |||| Sbjct 19220 TCGTCGCCTGGCTCGTCGCGGTGGTGTGAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 19279 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | ||||| ||| ||| |||| || || || |||||| || Sbjct 19280 CCGCGGGGTGCTGAAGGTGTTCCTGGAGAACGTGATCCGGGACGCGGTCACCTATACGGA 19339 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || |||||||||||| ||||||| | ||||| || | || ||||| || Sbjct 19340 GCACGCCAAGCGCAAGACTGTCACCGCCATGGACGTGGTCTACGCGCTCAAGCGTCAGGG 19399 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 ||| | | || || ||||| Sbjct 19400 CCGCACCCTCTACGGCTTTGG 19420 Score = 140 bits (154), Expect = 5e-29 Identities = 194/272 (71%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || || | ||| || || |||||||| || ||||| ||||| ||||| Sbjct 24942 CGCTAAGCGCCACCGTAAGGTTCTGCGCGACAACATCCAGGGCATCACTAAGCCTGCTAT 24883 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||||||||| ||||| || ||||| |||| || | |||| || |||| Sbjct 24882 CCGCCGCCTGGCTCGTCGCGGTGGTGTGAAGCGCATCTCCGGGCTCATCTACGAGGAGAC 24823 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | || ||||| | ||||| ||| ||| || | || || || ||| ||||| Sbjct 24822 CCGCGGGGTGCTGAAGGTGTTCCTGGAGAACGTGATTCGGGACGCGGTCACCTACACCGA 24763 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || || || ||||| | ||||| | ||||| || | || || || || Sbjct 24762 GCACGCCAAGCGGAAAACGGTCACTGCTATGGACGTGGTCTACGCTCTCAAGCGCCAGGG 24703 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 ||| | | || || ||||| ||||| ||| Sbjct 24702 CCGCACCCTCTACGGCTTTGGCGGTTAAGCTT 24671 >seq23862 Length=37113 Score = 132 bits (146), Expect = 8e-27 Identities = 196/275 (71%), Gaps = 2/275 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTC-GAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||||||||| || || | | |||| |||||||||||||||| ||||| ||||| |||| Sbjct 7025 CGCTAAGCGCCACCGGAAAG-TCTTGAGAGATAACATCCAAGGCATCACTAAGCCTGCTA 6967 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 | || || || ||||| ||||| |||||||| || | || || | | || || || | Sbjct 6966 TTCGGCGCCTTGCTCGGCGTGGGGGAGTCAAACGCATTTCCGGCCTTATTTACGAGGAAA 6907 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | || |||||| | ||||| ||| |||||| | || || || ||| || | Sbjct 6906 CCCGGGGCGTGTTGAAGGTGTTCCTGGAGAACGTTATTCGGGACGCGGTCACCTACACGG 6847 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || |||||||| ||||| ||||||| | ||||| || | || || || | Sbjct 6846 AGCACGCCAAGCGTAAGACGGTCACTGCCATGGACGTGGTCTACGCGCTAAAGCGGCAGG 6787 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705 | || | | || || || ||| ||| | || || Sbjct 6786 GACGCACCCTGTACGGCTTCGGAGGTTGAGCTGCT 6752 >seq10717 Length=117093 Score = 131 bits (144), Expect = 3e-26 Identities = 192/272 (71%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||| || | || ||| | || |||||||| || ||||| ||||| ||||| Sbjct 86209 CGCTAAGCGCCACCACAAGGTTCTGCACGACAACATCCAGGGCATCACTAAGCCTGCTAT 86268 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| || ||||||| ||||||||| || ||||| ||||||| | | || || |||| Sbjct 86269 CCGCCGCCTGGCTCTTCGTGGTGGTGTGAAGCGCATCTCTGGGCTCATTTACGAGGAGAC 86328 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || || |||| | || || ||| ||| | ||| || | || ||| ||||| Sbjct 86329 CCGCAGGGTCCTGAAAGTGTTTCTGGAGAACGTGACCCACGACGTGGTCACCTACACCGA 86388 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||| |||||||| ||||| | | ||||| || | || || || || Sbjct 86389 GCACGCCAAGCGGAAGGCTGTCACCGCCATGAACGTGGTCTACGCTCTCAAGCGCCAGGG 86448 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 ||||| | || |||| || ||||| ||| Sbjct 86449 CCGTACCCTCTACTGTTTCGGCGGTTAAGCTT 86480 >seq44051 Length=83322 Score = 113 bits (124), Expect = 7e-21 Identities = 154/218 (71%), Gaps = 13/218 (6%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 ||||| ||||||| || ||||| ||||| |||||||| || |||||||| ||||| ||| Sbjct 37940 CGAGACGACATCCAGGGGATCACTAAGCCCGCTATCCGCCGCCTGGCTCGGCGTGGAGGA 37999 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 |||||||| |||| || | |||| || ||| || | || ||| Sbjct 38000 GTCAAGCGCATCTCCGGCCTCATCTACGAGGAGTCCCGCGGGGTGTTG------------ 38047 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 ||| || || | ||||| || ||| ||||||||||| || | ||||||||||||| Sbjct 38048 -AGAATGTGATACGGGATGCGGTCACCTACACCGAGCACGCCAAGCCTAAGACTGTCACC 38106 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 ||||||| | ||||| || | || || ||||| || Sbjct 38107 GCCATGGACGTGGTCTACGCGCTCAAGCGCCAAGGACG 38144 >seq29519 Length=78358 Score = 109 bits (120), Expect = 9e-20 Identities = 131/178 (74%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||| ||| |||| |||| | ||||||||||| || ||||||||||| || || Sbjct 7281 CGCTAAGCATCACCGCAAGGTTCTTTGTGATAACATCCAGGGCATCACCAAGCCTGCCAT 7340 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||| |||||| | ||||| ||||| ||| | || ||||| | ||||||| |||| Sbjct 7341 CCGTCCTCTGGCCCAGCGTGGAGGAGTTAAGTGCGTTTCTGGCCTCATCTATGAGGAGAC 7400 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACC 16609 || | || |||||| | || || ||| ||| ||| ||||| || ||| ||| Sbjct 7401 CCGCGGGGTGTTGAAGGTGTTTCTAGAGAACGTGATCTGGGATGCGGTCACCTACACC 7458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78309761380047