Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq7597 102 8e-17 >seq7597 Length=568930 Score = 102 bits (112), Expect = 8e-17 Identities = 170/245 (69%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 26753 TTTTTAGTCAAACAAA--ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACC 26810 ||||| || |||| | ||||| | ||||||||||| ||||||| ||| | ||||| Sbjct 229618 TTTTTGTTCCAACAGACAATGCAGATCTTTGTAAAAACCCTAACTGGTAAAACCATCACT 229677 Query 26811 ATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAA 26870 | || | || | | |||||||||||| | ||||| ||||| || |||||| Sbjct 229678 CTGGAGGTGGAGCCTAGTGACACCATCGAGAATGTCAAGGGGAAGATCCAAGAAAAAGAA 229737 Query 26871 GGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA 26930 || || ||||| || || || || | || | | |||||||| || ||||||| | Sbjct 229738 GGCATCCCTCCAGACCAGCAGAGGTTGATCTTTGCAGGCAAACAGCTGGAAGATGGGCGC 229797 Query 26931 AACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGA 26990 | | | ||||| ||||| || ||||| || ||| | || |||||||| | || ||| Sbjct 229798 ACCCTGTCTGACTACAACATCCAGAAAGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGA 229857 Query 26991 GGAGG 26995 || || Sbjct 229858 GGTGG 229862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473653323632880