Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq9815 86.0 5e-12 >seq9815 Length=175929 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||| ||||| || || || || ||||| || ||||| || |||| ||| | Sbjct 59595 AAGATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAGCCG 59654 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || || | | | | ||||| || || ||||||||||| | || ||| Sbjct 59655 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGAC 59714 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||||||||| || | ||| ||||| ||| | ||||||| || || | || || Sbjct 59715 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGGCGTACTTTGTCTGACTAC 59774 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 ||||||||||| ||||| ||| | ||| | ||||| ||| | || || || Sbjct 59775 AACATTCAAAAGGAGTCCACTCTTCATCTAGTGTTAAGACTTCGTGGTGG 59824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421004164525480