Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq10000 158 3e-33 seq2775 147 5e-30 seq9815 141 2e-28 seq5931 129 1e-24 seq7597 125 2e-23 seq308 107 4e-18 seq6385 100 7e-16 seq12619 95.1 3e-14 seq23701 86.0 1e-11 seq79141 84.2 5e-11 seq65401 84.2 5e-11 >seq10000 Length=929206 Score = 158 bits (174), Expect = 3e-33 Identities = 166/218 (76%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || |||||||| || |||| |||||| |||| | ||| | |||||| Sbjct 685735 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 685676 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| |||||||| ||||||||||| || ||| ||||| ||| Sbjct 685675 TCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 685616 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | || || ||||| ||||| ||| Sbjct 685615 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTC 685556 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || || || || || ||||| || ||||| |||||| Sbjct 685555 TTGCCGGTCAGGGTCTTCACGAAGATTTG---CATTTT 685521 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || |||||||| || |||| |||||| |||| | ||| | |||||| Sbjct 685963 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 685904 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| |||||||| ||||||||||| || ||| ||||| ||| Sbjct 685903 TCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 685844 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | || || |||| ||||| ||| Sbjct 685843 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 685784 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 685783 TTGCCGGTCAGGGTCTTGACGAAGATCTG 685755 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || |||||||| || |||| |||||| |||| | ||| | |||||| Sbjct 686191 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 686132 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| |||||||| ||||||||||| || ||| ||||| ||| Sbjct 686131 TCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 686072 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | || || |||| ||||| ||| Sbjct 686071 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 686012 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 686011 TTGCCGGTCAGGGTCTTGACGAAGATCTG 685983 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || |||||||| || |||| |||||| |||| | ||| | |||||| Sbjct 686419 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 686360 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| |||||||| ||||||||||| || ||| ||||| ||| Sbjct 686359 TCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 686300 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | || || |||| ||||| ||| Sbjct 686299 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 686240 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 686239 TTGCCGGTCAGGGTCTTGACGAAGATCTG 686211 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || |||||||| || |||| |||||| |||| | ||| | |||||| Sbjct 686647 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 686588 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| |||||||| ||||||||||| || ||| ||||| ||| Sbjct 686587 TCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 686528 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | || || |||| ||||| ||| Sbjct 686527 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 686468 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 686467 TTGCCGGTCAGGGTCTTGACGAAGATCTG 686439 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || |||||||| || |||| |||||| |||| | ||| | |||||| Sbjct 686875 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 686816 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| |||||||| ||||||||||| || ||| ||||| ||| Sbjct 686815 TCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 686756 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | || || |||| ||||| ||| Sbjct 686755 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 686696 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 686695 TTGCCGGTCAGGGTCTTGACGAAGATCTG 686667 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || |||||||| || |||| |||||| |||| | ||| | |||||| Sbjct 687103 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 687044 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| |||||||| ||||||||||| || ||| ||||| ||| Sbjct 687043 TCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 686984 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | || || |||| ||||| ||| Sbjct 686983 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 686924 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 686923 TTGCCGGTCAGGGTCTTGACGAAGATCTG 686895 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || |||||||| || |||| |||||| |||| | ||| | |||||| Sbjct 687331 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 687272 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| |||||||| ||||||||||| || ||| ||||| ||| Sbjct 687271 TCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 687212 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | || || |||| ||||| ||| Sbjct 687211 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 687152 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 687151 TTGCCGGTCAGGGTCTTGACGAAGATCTG 687123 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || |||||||| || |||| |||||| |||| | ||| | |||||| Sbjct 687559 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 687500 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||| |||||||| ||||||||||| || ||| ||||| ||| Sbjct 687499 TCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 687440 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| |||||| | | || || |||| ||||| ||| Sbjct 687439 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 687380 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || || || Sbjct 687379 TTGCCGGTCAGGGTCTTGACGAAGATCTG 687351 >seq2775 Length=875267 Score = 147 bits (162), Expect = 5e-30 Identities = 162/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 |||||||| ||||| || ||||| ||||||||||| | ||||||||||| |||||| | Sbjct 378410 AAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACG 378351 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 |||||||||||| ||||| | || ||||| || | |||||||| ||| ||||||||| Sbjct 378350 TCCATCTTCCAGTTGCTTGCAAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTC 378291 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 | ||| ||||| ||| || ||| | ||| || | | | || || | || Sbjct 378290 CTTATTCTGGATCTTGGCCTTTACATTTTCTATGGTATCCGAGGGCTTGACCTCGAGAGT 378231 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| ||||| ||||| ||||||||||| || Sbjct 378230 GATGGTCTTCCCCGTCAGAGTCTTCACAAAAATCTG 378195 Score = 87.8 bits (96), Expect = 4e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| ||| ||||| || | ||||| ||||||||||| | |||||| | || |||||| Sbjct 378313 AAAGACTGATCTTTGCTTGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 378372 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTT 201027 | || || ||||| |||||||| ||||| ||||||||| Sbjct 378373 TTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTT 378410 >seq9815 Length=175929 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||| | || || || ||||| ||||||||||| | ||||||||||| |||||| Sbjct 59818 CGAAGTCTTAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 59759 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||| ||||| || || ||||| || | |||||||| ||| ||||||| Sbjct 59758 CGCCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCT 59699 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| ||||| ||||| ||| || ||| | || || | | || || || | Sbjct 59698 TCTTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGACGGCTCGACCTCGAGA 59639 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| || || ||||| ||||| || Sbjct 59638 GTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTG 59601 >seq5931 Length=560455 Score = 129 bits (142), Expect = 1e-24 Identities = 160/218 (73%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 |||||||||| || || || ||||| ||||||||||| | ||||||| ||| |||||| Sbjct 199279 CGAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAG-CAGACAAAGTA 199337 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||| ||||| || || ||||| || | ||||||| | | ||||||| Sbjct 199338 CGTCCATCTTCCAGTTGCTTGCCAGCTAAGATCAGTCCTTGCTGGTAAGAAGGAATTCCT 199397 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || ||| | || || | | || || || | Sbjct 199398 TCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCCACCTCAAGA 199457 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || || ||||||||||| || Sbjct 199458 GTGATGGTCTTCCCTGTCAGGGTCTTCACAAAAATCTG 199495 >seq7597 Length=568930 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| ||||| || |||| ||||||||||| || || | |||||| Sbjct 229847 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 229788 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || || || ||||| | | ||||||||| ||| || |||||| || Sbjct 229787 TCCAGCTGTTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGAGGGATGCCTTCTTTTTCT 229728 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || |||| ||||| || Sbjct 229727 TGGATCTTCCCCTTGACATTCTCGATGGTGTCACTAGGCTCCACCTCCAGAGTGATGGTT 229668 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || ||||| ||||| || || Sbjct 229667 TTACCAGTTAGGGTTTTTACAAAGATCTG 229639 Score = 104 bits (114), Expect = 5e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| | ||| ||||| ||||| || |||| ||||||||||| || || | ||||| Sbjct 230304 CAGGACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 230245 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||||||||| || || || ||||| | | ||||||||| || || || || || Sbjct 230244 TTCCAGCTGTTTCCCCGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 230185 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 || ||||| ||| || |||| |||||| | | || || |||| ||||| || Sbjct 230184 TTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 230125 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| || | || ||||| || || || Sbjct 230124 CTTACCGGTCAAGGTCTTCACGAAGATCTG 230095 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| ||||| || |||| ||||||||| | || || | |||||| Sbjct 230075 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGCCCATCT 230016 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||| || || || ||||| | | ||||||||| || || || || || Sbjct 230015 TCCAGCTGTTTCCCCGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT 229956 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| |||||| | | || || |||| ||||| ||| Sbjct 229955 TGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 229896 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || | || ||||| || || || Sbjct 229895 TTACCGGTCAAGGTCTTCACGAAGATCTG 229867 >seq308 Length=189498 Score = 107 bits (118), Expect = 4e-18 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| || || || ||||| | ||||||||| | |||||||||| |||| | Sbjct 115899 GAAGTCTCAACACTAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCA----AAGTAC 115954 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 |||||||||||| ||||| || || ||||| || | |||||||| ||| |||||||| Sbjct 115955 GTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTT 116014 Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589 | ||||| ||||| ||| || ||| || || | | || || | | Sbjct 116015 CCTTATCCTGGATCTTGGCCTTTACATTTTCTTTTGTATCCGAGGGCTCCACCTTGAGAA 116074 Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| ||||| ||| | || || ||||| ||||| || Sbjct 116075 TGATGGTCTTCCCCATCAGGGTCTTCACGAAAATCTG 116111 >seq6385 Length=214227 Score = 100 bits (110), Expect = 7e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||| ||| ||||| || ||||| | || ||||| ||||||||||| |||||| | | Sbjct 138826 AGTTTCAACACAAGATGAAGAGTGGGCTGCTTTTCAGTGTTGTAGTCAGACAAAGTACAT 138767 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||| ||||| || || ||| | || | |||||||| ||| ||| ||||| Sbjct 138766 CCATCTTCCAGTTGCTTGCCAGCAAAGGTCAGTCTTTGCTGGTCAGGAGGAATCCCTTCC 138707 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| ||| || ||| | || || | | || || || | ||| Sbjct 138706 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCGACCTCGATAGTG 138647 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| | || || || |||| ||||| || Sbjct 138646 ATGGTCTTCACTGTTAGGGTCTTCATGAAAATCTG 138612 >seq12619 Length=221303 Score = 95.1 bits (104), Expect = 3e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||| |||||| ||||| || ||||| ||||||||||| | ||||||| || ||||| Sbjct 123126 CGACGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATATTGTAGTTAGACAAAGGA 123067 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||||||| ||||| || | | ||| || | |||||||| | | || |||| Sbjct 123066 CATCCATCTTCCAGTTGCTTGCCAGTAACGATCAGTCTTTGCTGGTCAGAAGGAACTCCT 123007 Query 199529 TCTCGCTCCTGAATCTT 199545 || ||||| ||||| Sbjct 123006 TCCTTATCCTGGATCTT 122990 >seq23701 Length=42229 Score = 86.0 bits (94), Expect = 1e-11 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| || || || ||||| ||||||||||| | ||||||||||| |||||| | Sbjct 16808 GAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTAC 16867 Query 199470 TTCCATCTTCCAGCTGCTTTCC 199491 ||||||||| || ||||| || Sbjct 16868 ATCCATCTTCTAGTTGCTTGCC 16889 >seq79141 Length=699 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 ||||||| | ||||||||||| |||||| | ||||||||||| ||||| || || |||| Sbjct 383 CCTTTTGAATGTTGTAGTCAGACAAAGTACGCCCATCTTCCAGTTGCTTGCCAGCAAAGA 324 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || | |||||||| ||| ||||||| Sbjct 323 TCAGTCTTTGCTGGTCAGGAGGAATTCCT 295 >seq65401 Length=4121 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 ||||||| | ||||||||||| |||||| | ||||||||||| ||||| || || |||| Sbjct 220 CCTTTTGAATGTTGTAGTCAGACAAAGTACGCCCATCTTCCAGTTGCTTGCCAGCAAAGA 161 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || | |||||||| ||| ||||||| Sbjct 160 TCAGTCTTTGCTGGTCAGGAGGAATTCCT 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1166276067295993