Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_019402.1 Length=76631 Score E Sequences producing significant alignments: (Bits) Value seq397273 109 3e-19 >seq397273 Length=255 Score = 109 bits (120), Expect = 3e-19 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 4006 ACTGCAACGACTGGTGG-CTTGATTACAATCACAGCAACACCTGAAAATGGTTTAACAAA 4064 ||||| || ||||| || |||| | ||||||||||| || ||||| || ||| | || | Sbjct 1 ACTGCTACAACTGGCGGTCTTG-TAACAATCACAGCTACTCCTGAGAACGGTCTGACTGA 59 Query 4065 ACTAGTTGACCTGTTTATGAAAGATAATTCAGGTTATTTATATTTCCAAAATGCTACTTG 4124 ||| ||| | ||| ||||| ||| | || || | |||| || || || || || Sbjct 60 ACTGGTTAAGAAGTTCATGAATGATGAGTCTGGAGCACTGTATTGGCAGAACGCAACGTG 119 Query 4125 GGATGATGCACCGCACTTAGATGAAGAAACGAAAGCGGAACTGTTAGCGTCTATTCCAGC 4184 |||||||||||| ||| | |||||| ||||| || || | ||||||||||| | Sbjct 120 GGATGATGCACCTCACCTGAGTGAAGAGACGAAGAAAGAGCTTCTGGCGTCTATTCCTGA 179 Query 4185 ATGGCAGCATGAAATGCGTAGTCGAGGTATTCCAATGATGGG 4226 ||||| ||||| |||||| | |||| | ||||| |||| Sbjct 180 GTGGCAACATGACATGCGTTCTAAAGGTTTACCAATCTTGGG 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242593672655248