Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq7597 86.0 5e-12 >seq7597 Length=568930 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || ||||||||||| |||| ||||||||||| || || ||| ||| Sbjct 229635 AATGCAGATCTTTGTAAAAACCCTAACTGGTAAAACCATCACTCTGGAGGTGGAGCCTAG 229694 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || ||||| || ||| || ||||| || | || ||| || Sbjct 229695 TGACACCATCGAGAATGTCAAGGGGAAGATCCAAGAAAAAGAAGGCATCCCTCCAGACCA 229754 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||||| | |||||||| |||||||| |||||||| || || | || || || Sbjct 229755 GCAGAGGTTGATCTTTGCAGGCAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 229814 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGT 28762 ||| || ||||| || ||||||||| |||| Sbjct 229815 CATCCAGAAAGAGTCCACTCTGCACCTGGT 229844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421064344175841