Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq47603 87.8 2e-12 >seq47603 Length=51043 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 48074 CACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCT 48133 |||||||||| || || || ||||||||||||||||| |||| || |||| ||||||| Sbjct 10570 CACCATAAGGGGAGCGCGGGTAGAAAGGTGTGGTCTCCTTCTGGGGTATCTCCTGCACCT 10629 Query 48134 TACCATAAAGTTCACTGGTGGATGCTTGATAGATACGAACC 48174 | ||||| || || || || || ||||| |||| || ||| Sbjct 10630 TCCCATAGAGCTCGCTCGTCGAGGCTTGGTAGAACCGCACC 10670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658530175796280