Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq6048 134 2e-25 seq5280 134 2e-25 seq35553 125 9e-23 seq11197 125 9e-23 seq9962 125 9e-23 seq83281 120 4e-21 seq44051 116 4e-20 seq23862 113 5e-19 seq34052 105 8e-17 seq408215 95.1 1e-13 seq397788 93.3 5e-13 seq28310 87.8 2e-11 >seq6048 Length=345543 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | || ||| ||||||||||||||||| | | || Sbjct 111482 GCTTGGCCAGCTCGCCGGGCAGCAGCAAGCGTACGGCGGTCTGGATCTCCCTGGATGTGA 111423 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || |||||| ||||||| |||| | Sbjct 111422 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAAA 111363 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || ||||| ||||||| ||||| |||| |||||||| ||| |||| Sbjct 111362 TGTCGTTCACGAACGAATTCATGATGCCCATCGCCTTGGACGAGATGCCGGTGTCCGGGT 111303 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 111302 GGACCTGCTTCAGCACCTTGTA 111281 Score = 122 bits (134), Expect = 1e-21 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | ||||||||||||||||||||||| | | || Sbjct 171909 GCTTGGCCAGCTCCCCAGGCAACAGAAGGCGCACGGCGGTCTGGATCTCCCTGGATGTGA 171850 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| |||| || || | | Sbjct 171849 TGGTCGAGCGCTTGTTATAGTGCGCCAGCCGCGATGCCTCGCCTGCGATACGCTCAAAAA 171790 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||| ||||| |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 171789 TATCGTTCACAAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 171730 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 171729 GGACCTGCTTCAGCACCTTGTA 171708 Score = 120 bits (132), Expect = 4e-21 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 |||||| || ||| ||| | |||||||||||| ||||||||||| | | ||| | Sbjct 95961 TGGCCAACTCCCCGGGCAACAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGATGG 95902 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | || ||||| || |||||| ||||||| |||| |||| Sbjct 95901 TCGAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 95842 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 95841 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 95782 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| || |||||||| Sbjct 95781 CCTGCTTCAGTACCTTGTA 95763 Score = 116 bits (128), Expect = 4e-20 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || || ||| | ||||||||| || ||||||||||| | | ||| | Sbjct 61112 TGGCCAGCTCCCCAGGCAACAGCAGGCGCACAGCCGTCTGGATCTCCCTGGATGTGATGG 61171 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || || ||| ||||||| |||| |||| Sbjct 61172 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCTTCGCCCGCGATGCGCTCGAAGATGT 61231 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| || ||||| ||| ||||| | Sbjct 61232 CGTTGACGAAGGAGTTCATGATACCCATAGCCTTGGACGAAATGCCGGTGTCCGGGTGGA 61291 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 61292 CCTGCTTCAGCACCTTGTA 61310 Score = 116 bits (128), Expect = 4e-20 Identities = 132/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 1254368 CAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGC 1254427 ||||||||| |||||||||||||| | | ||| || ||||||||| | ||||| Sbjct 123641 CAGGCGCACTGCGGTCTGGATCTCCCTGGATGTGATAGTCGAGCGCTTGTTGTAATGCGC 123582 Query 1254428 CAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAC 1254487 ||| || |||||| | | ||||| |||| |||||||| || || |||||||||| Sbjct 123581 CAGGCGCGACGCCTCGCCGGCAATGCGCTCGAAGATGTCGTTAACGAAGGAGTTCATGAT 123522 Query 1254488 CGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 ||| | |||| |||||||| ||| ||||| |||||||| ||||||||||| Sbjct 123521 GCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGACCTGCTTCAGCACCTTGTA 123465 Score = 116 bits (128), Expect = 4e-20 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || ||| | ||||||||| || ||||||||||| | | | || Sbjct 185285 GCTTGGCCAGCTCTCCCGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCTGGAGGTGA 185226 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | || ||||| || |||||| ||||||| || | | Sbjct 185225 TGGTCGACCGCTTGTTGTAATGTGCCAGGCGTGACGCCTCGCCCGCGATGCGCTCAAAGA 185166 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 185165 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 185106 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 185105 GGACCTGCTTCAGCACCTTGTA 185084 Score = 113 bits (124), Expect = 5e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || || ||| | ||||||||| || ||||||||||| | | || Sbjct 132477 GCTTGGCCAACTCCCCAGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCTGGATGTGA 132536 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||||||||| || |||||| |||| || || | | Sbjct 132537 TGGTCGAGCGCTTGTTATAGTGCGCCAGCCGCGATGCCTCGCCTGCGATACGCTCAAAAA 132596 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 | ||||| ||||| |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 132597 TATCGTTCACAAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 132656 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 132657 GGACCTGCTTCAGCACCTTGTA 132678 Score = 104 bits (114), Expect = 3e-16 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | |||||||||||| ||||||||||| | | || Sbjct 1530 GCTTGGCCAGCTCCCCGGGGAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGATGTGA 1589 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||| ||||| | |||||||| || |||||| ||||||| |||| | Sbjct 1590 TGGTCGAGCGTTTGTTATAATGCGCCAGGCGTGACGCCTCGCCCGCGATGCGCTCGAAAA 1649 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||||| ||| | ||| |||||||| || || | Sbjct 1650 TGTCGTTCACGAAGGAGTTCATGATGCCCATGGCCTTAGATGAGATGCCAGTATCCGGAT 1709 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| || |||||||| Sbjct 1710 GGACCTGCTTCAGAACCTTGTA 1731 >seq5280 Length=289158 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 277347 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 277288 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || || | || || ||| ||||||| |||| | Sbjct 277287 TGGTCGAGCGCTTGTTGTAATGGGCTAAGCGCGACGCTTCGCCCGCGATGCGCTCGAAGA 277228 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| |||||||||||||||| ||| | |||| |||||||| ||| |||| Sbjct 277227 TGTCGTTCACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 277168 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 277167 GCACCTGCTTCAGCACCTTGTA 277146 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 288340 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 288399 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || || | || || ||| ||||||| |||| | Sbjct 288400 TGGTCGAGCGCTTGTTGTAATGGGCTAAGCGCGACGCTTCGCCCGCGATGCGCTCGAAGA 288459 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| |||||||||||||||| ||| | |||| |||||||| ||| |||| Sbjct 288460 TGTCGTTCACAAACGAGTTCATGATGCCCATGGCCTTGGATGAGATGCCGGTGTCCGGGT 288519 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 288520 GCACCTGCTTCAGCACCTTGTA 288541 Score = 131 bits (144), Expect = 2e-24 Identities = 150/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | ||||||||| || ||||||||||| || | || Sbjct 255922 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACTGCCGTCTGGATCTCCCGGGACGTGA 255863 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || || ||| ||||||| |||| | Sbjct 255862 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGATGCTTCGCCCGCGATGCGCTCGAAGA 255803 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| |||||||||||||||| ||| | |||| ||||| || ||| || | Sbjct 255802 TGTCGTTCACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGATACCAGTGTCCGGAT 255743 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| || |||||||| Sbjct 255742 GCACCTGCTTCAGGACCTTGTA 255721 >seq35553 Length=33913 Score = 125 bits (138), Expect = 9e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 ||||| || ||| ||| | ||||| ||||||||||||||||| | | ||| || Sbjct 27934 GCCAGCTCCCCGGGCAACAGAAGGCGTACGGCGGTCTGGATCTCCCTGGATGTGATGGTC 27993 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 ||||||||| | |||||||| || |||||| ||||||| |||| |||||| Sbjct 27994 GAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCG 28053 Query 1254468 TTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACC 1254527 ||||| || |||||||||| ||| | |||| |||||||| ||| ||||| ||| Sbjct 28054 TTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGACC 28113 Query 1254528 TGCTTGAGCACCTTGTA 1254544 ||||| ||||||||||| Sbjct 28114 TGCTTCAGCACCTTGTA 28130 Score = 120 bits (132), Expect = 4e-21 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || || ||| | |||||||||||||||||||||||| | | || | Sbjct 7609 TGGCCAGCTCTCCAGGCAGCAGCAGGCGCACGGCGGTCTGGATCTCCCTGGATGTAATGG 7668 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || |||||| ||||||| |||| || | Sbjct 7669 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAAATAT 7728 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||| || ||||| ||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 7729 CGTTCACGAACGAATTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 7788 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 7789 CCTGCTTCAGCACCTTGTA 7807 >seq11197 Length=53898 Score = 125 bits (138), Expect = 9e-23 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 |||||| |||||| ||| | ||||||||| || || || | ||| || | ||| | Sbjct 15468 TGGCCAACTCGCCGGGCAACAGCAGGCGCACAGCCGTTTGCACCTCCCGGGACGTGATGG 15409 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | |||||||| ||||||||| |||| ||||||| || |||| || |||| |||| Sbjct 15408 TAGAACGCTTGTTGTAGTGCGCCAAACGGGAGGCCTCGCTGGCGATACGCTCGAAGATGT 15349 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||| || ||||||||||||| ||| | |||| ||||| || ||| ||||||| Sbjct 15348 CGTTCACGAACGAGTTCATGATGCCCATAGCCTTGGAAGAGATACCGGTGTCTGGGTGCA 15289 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 | ||||| |||||||| || Sbjct 15288 CTTGCTTCAGCACCTTATA 15270 >seq9962 Length=93654 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||| || ||||||||||| | | || Sbjct 73360 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACCGCCGTCTGGATCTCCCTGGATGTGA 73419 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || |||||| ||||||| |||| | Sbjct 73420 TGGTCGAGCGCTTGTTATAATGAGCCAGGCGCGACGCCTCGCCAGCGATGCGCTCGAAGA 73479 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 73480 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 73539 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 73540 GGACCTGCTTCAGCACCTTGTA 73561 Score = 125 bits (138), Expect = 9e-23 Identities = 149/202 (74%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||| || ||||||||||| | | || Sbjct 78130 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACCGCCGTCTGGATCTCCCTGGATGTGA 78189 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || ||||| || |||||| ||||||| |||| | Sbjct 78190 TGGTCGAGCGCTTGTTATAATGAGCCAGGCGCGACGCCTCGCCAGCGATGCGCTCGAAGA 78249 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | |||| |||||||| ||| |||| Sbjct 78250 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGT 78309 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 78310 GGACCTGCTTCAGCACCTTGTA 78331 >seq83281 Length=1450 Score = 120 bits (132), Expect = 4e-21 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || || ||| | ||||||||| || ||||||||||| | | ||| | Sbjct 842 TGGCCAGCTCTCCCGGCAGCAGCAGGCGCACAGCCGTCTGGATCTCCCTGGATGTGATGG 783 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | || ||||| || |||||| ||||||| |||| |||| Sbjct 782 TCGAGCGCTTGTTGTAATGAGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGT 723 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| || |||||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 722 CGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGGA 663 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 ||||||| ||||||||||| Sbjct 662 CCTGCTTCAGCACCTTGTA 644 >seq44051 Length=83322 Score = 116 bits (128), Expect = 4e-20 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405 ||||||| || || ||| | ||||||||| || ||||||||||| | | ||| | Sbjct 29455 TGGCCAGCTCCCCAGGCAGCAGCAGGCGCACCGCCGTCTGGATCTCCCTGGATGTGATGG 29514 Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | ||||||||| | |||||||| || ||||| ||||||| |||| |||| Sbjct 29515 TCGAGCGCTTGTTGTAATGCGCCAGGCGCGACGCCTCACCCGCGATGCGCTCGAAGATGT 29574 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 |||| ||||| |||||||||| ||| | |||| |||||||| ||| ||||| | Sbjct 29575 CGTTCACAAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCCGGGTGAA 29634 Query 1254526 CCTGCTTGAGCACCTTGTA 1254544 |||| || ||||||||||| Sbjct 29635 CCTGTTTCAGCACCTTGTA 29653 Score = 107 bits (118), Expect = 2e-17 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || || | | | ||||||||| || ||||||||||| | | || Sbjct 38529 GCTTGGCCAGCTCTCCCGGGAGCAGCAGGCGCACCGCCGTCTGGATCTCCCTGGATGTGA 38588 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||| ||||| | || ||||| || |||||| ||||||| |||| | Sbjct 38589 TGGTCGAGCGTTTGTTGTAATGGGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAAA 38648 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||||| ||| | ||| |||||||| ||| |||| Sbjct 38649 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTAGACGAGATGCCGGTGTCCGGGT 38708 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 38709 GGACCTGCTTCAGCACCTTGTA 38730 >seq23862 Length=37113 Score = 113 bits (124), Expect = 5e-19 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | || |||||| || ||||||||||| || | || Sbjct 20821 GCTTGGCCAGCTCGCCGGGCAGCAGCAAGCGCACTGCCGTCTGGATCTCCCGGGACGTGA 20762 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | |||||||| || || ||| | | ||||| |||| | Sbjct 20761 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGCGATGCTTCGCCGGCAATGCGCTCGAAGA 20702 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| || |||||||||| ||| | ||| |||||||| ||| |||| Sbjct 20701 TGTCATTGACGAAGGAGTTCATGATGCCCATGGCCTTAGACGAGATGCCGGTGTCCGGGT 20642 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 ||||||| || ||||| || || Sbjct 20641 GCACCTGTTTCAGCACTTTATA 20620 >seq34052 Length=63847 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||| || ||| | ||||||||| || || ||||| || | | || Sbjct 11602 GCTTGGCCAGTTCCCCAGGCAGCAGCAGGCGCACAGCTGTTTGGATTTCCCTGGACGTGA 11543 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| | || ||||| || |||||| ||||||| || | | Sbjct 11542 TAGTGGAGCGCTTGTTATAATGTGCCAGGCGCGACGCCTCGCCTGCGATGCGCTCAAAAA 11483 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| |||| ||||| ||||||| ||| | ||| ||||||||| || |||| Sbjct 11482 TGTCACTGACGAACGAATTCATGATGCTCATGGCCTTTGAAGAGATGCCCGTATCTGGGT 11423 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || ||||| ||||||||||||||| Sbjct 11422 GAACTTGCTTCAGCACCTTGTAGATG 11397 >seq408215 Length=257 Score = 95.1 bits (104), Expect = 1e-13 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 1254448 CGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGA 1254507 ||||||| |||| |||||||| |||||||||||||||| ||| | |||| |||| Sbjct 27 CGATGCGCTCGAAGATGTCGTTCACAAACGAGTTCATGATGCCCATGGCCTTGGACGAGA 86 Query 1254508 TGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544 |||| ||| |||||||||||||| ||||||||||| Sbjct 87 TGCCGGTGTCCGGGTGCACCTGCTTCAGCACCTTGTA 123 >seq397788 Length=255 Score = 93.3 bits (102), Expect = 5e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| |||||| ||| | |||||||||||| ||||||||||| || | || Sbjct 96 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGA 155 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| | || || | || || ||| ||||||| |||| | Sbjct 156 TGGTCGAGCGCTTGTTGTAATGGGCTAAGCGCGACGCTTCGCCCGCGATGCGCTCGAAGA 215 Query 1254463 TGTCGTTGACAAACGAGTTCATGA 1254486 ||||||| |||||||||||||||| Sbjct 216 TGTCGTTCACAAACGAGTTCATGA 239 >seq28310 Length=71854 Score = 87.8 bits (96), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||||||||| || | || || |||||| | |||||||| | ||| ||| || Sbjct 28038 ACACTCTTTGAGTTTATATTGGCAGCAAACTACTTAGACATCAAAGGTTCGCTTGATGTT 28097 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| |||| || || ||||||||||| || | || |||||||| || ||||| Sbjct 28098 ACCTGCAAGACTGTTGCTAATATGATCAAGGGGAAAACTCCTGAGGAGATTCGAAAGACA 28157 Query 1592285 TTTAACATCAA 1592295 || || ||||| Sbjct 28158 TTCAATATCAA 28168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6038436370750743