Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq24882 86.0 6e-12 >seq24882 Length=184284 Score = 86.0 bits (94), Expect = 6e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 43867 TCCGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGT 43926 ||| ||| || || || || || || |||||||||||| ||||||||| ||| ||||||| Sbjct 115568 TCCTCTGAAAAGTCCCATCCAGCGCAGCCACGATGACGGTCTTCCCCGAGTTGGCCATGT 115627 Query 43927 CCTCGCAGAACTCCACTAGGTC 43948 ||||||||||||||| | ||| Sbjct 115628 TCTCGCAGAACTCCACGATGTC 115649 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471059949616920