Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq7597 109 7e-19 seq22877 105 9e-18 seq8879 105 9e-18 seq833332 104 3e-17 seq33989 104 3e-17 seq15363 104 3e-17 seq3172 104 3e-17 seq17744 100 4e-16 seq5079 95.1 2e-14 seq778271 91.5 2e-13 seq2775 86.0 8e-12 >seq7597 Length=568930 Score = 109 bits (120), Expect = 7e-19 Identities = 74/82 (90%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 ||||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 218674 AGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 218733 Query 11787 TCCCCGACGAGGAGGGAGGTTA 11808 ||||||||| ||||| || ||| Sbjct 218734 TCCCCGACGGGGAGGCAGATTA 218755 Score = 105 bits (116), Expect = 9e-18 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 218673 TAGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 218732 Query 8715 TTCCCCGACGAGGA-GCAGA 8733 |||||||||| ||| ||||| Sbjct 218733 TTCCCCGACGGGGAGGCAGA 218752 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 215768 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 215827 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 215828 CCCGACGGGGAG 215839 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 215768 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 215827 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 215828 CCCGACGGGGAG 215839 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 215840 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 215781 Query 139412 ATACTAACGAGGAT 139425 |||||||||||||| Sbjct 215780 ATACTAACGAGGAT 215767 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 218747 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 218688 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 218687 TACTAACGAGGA 218676 >seq22877 Length=61752 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| |||||||||||||||||||| Sbjct 53689 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCAAGCGGGAGACCGGGGTTCGATT 53748 Query 8717 CCCCGACGAGGAG 8729 ||||||||||||| Sbjct 53749 CCCCGACGAGGAG 53761 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| ||||||||||||||||||||| Sbjct 53690 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCAAGCGGGAGACCGGGGTTCGATTC 53749 Query 11789 CCCGACGAGGAG 11800 |||||||||||| Sbjct 53750 CCCGACGAGGAG 53761 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||||||||||||| |||||||||||||||||| |||| |||||||| | ||||||| Sbjct 53761 CTCCTCGTCGGGGAATCGAACCCCGGTCTCCCGCTTGACAGGCGGGGATACTCACCACTA 53702 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 53701 TACTAACGAGGA 53690 >seq8879 Length=52963 Score = 105 bits (116), Expect = 9e-18 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||||| Sbjct 50409 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 50468 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 50469 CCCCGACGGGGAG 50481 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 50410 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 50469 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 50470 CCCGACGGGGAGG 50482 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 50481 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 50422 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 50421 TACTAACGAGGA 50410 >seq833332 Length=2258 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 60 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 61 CCCGACGGGGAG 72 Score = 100 bits (110), Expect = 4e-16 Identities = 66/72 (92%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 1 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 60 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 61 CCCGACGGGGAG 72 Score = 96.9 bits (106), Expect = 4e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 139352 ACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACT 139411 ||||| ||||||||| |||||||||||||||||| | |||| |||||||| | |||||| Sbjct 73 ACTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 14 Query 139412 ATACTAACGAGGA 139424 ||||||||||||| Sbjct 13 ATACTAACGAGGA 1 >seq33989 Length=101148 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||||||||| |||| ||||| | |||||||||||||||| |||| Sbjct 4211 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 4270 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 4271 CCCGACGGGGAG 4282 Score = 96.9 bits (106), Expect = 4e-15 Identities = 66/73 (90%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||| |||| Sbjct 4211 TCCTCGTTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCAATTC 4270 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 4271 CCCGACGGGGAGG 4283 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| | |||||||||||||||| | |||| |||||||| ||||||||| Sbjct 4282 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 4223 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 4222 TACTAACGAGGA 4211 >seq15363 Length=175237 Score = 104 bits (114), Expect = 3e-17 Identities = 70/77 (91%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 18336 CACTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 18277 Query 11786 TTCCCCGACGAGGAGGG 11802 |||||||||| |||||| Sbjct 18276 TTCCCCGACGGGGAGGG 18260 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 18333 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 18274 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 18273 CCCGACGGGGAG 18262 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 18262 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 18321 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 18322 TACTAACGAGGA 18333 >seq3172 Length=181413 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 103529 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 103470 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 103469 CCCGACGGGGAG 103458 Score = 104 bits (114), Expect = 3e-17 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 104464 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 104405 Query 8718 CCCGACGAGGAG 8729 ||||||| |||| Sbjct 104404 CCCGACGGGGAG 104393 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 103529 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 103470 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 103469 CCCGACGGGGAGG 103457 Score = 102 bits (112), Expect = 1e-16 Identities = 67/73 (92%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 104464 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 104405 Query 11789 CCCGACGAGGAGG 11801 ||||||| ||||| Sbjct 104404 CCCGACGGGGAGG 104392 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 103458 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 103517 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 103518 TACTAACGAGGA 103529 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| ||||||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 104393 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 104452 Query 139413 TACTAACGAGGA 139424 |||||||||||| Sbjct 104453 TACTAACGAGGA 104464 >seq17744 Length=78395 Score = 100 bits (110), Expect = 4e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||| ||||||||||| Sbjct 4645 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACAGGGGTTCGATT 4586 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 4585 CCCCGACGGGGAG 4573 Score = 100 bits (110), Expect = 4e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8657 TTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 8716 |||||||||||||||||||| ||||| |||| ||||| | |||||||| ||||||||||| Sbjct 6243 TTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACAGGGGTTCGATT 6184 Query 8717 CCCCGACGAGGAG 8729 |||||||| |||| Sbjct 6183 CCCCGACGGGGAG 6171 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||| |||||||||||| Sbjct 4644 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACAGGGGTTCGATTC 4585 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 4584 CCCGACGGGGAG 4573 Score = 95.1 bits (104), Expect = 2e-14 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| | |||||||| |||||||||||| Sbjct 6242 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACAGGGGTTCGATTC 6183 Query 11789 CCCGACGAGGAG 11800 ||||||| |||| Sbjct 6182 CCCGACGGGGAG 6171 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| ||||||||| |||||||| | |||| |||||||| | ||||| Sbjct 4571 AACTCCCCGTCGGGGAATCGAACCCCTGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 4630 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 4631 TATACTAACGAGGA 4644 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| ||||||||| ||||||||| |||||||| | |||| |||||||| | ||||| Sbjct 6169 AACTCCCCGTCGGGGAATCGAACCCCTGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 6228 Query 139411 TATACTAACGAGGA 139424 |||||||||||||| Sbjct 6229 TATACTAACGAGGA 6242 >seq5079 Length=123437 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 ||||||||||||||||||| ||||| |||| ||||| ||||||||||| |||||| |||| Sbjct 18839 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACACGGGAGACCAGGGTTCAATTC 18780 Query 8718 CCCGACGAGGAG 8729 || |||| |||| Sbjct 18779 CCAGACGGGGAG 18768 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 ||||||||||||||||||| ||||| |||| ||||| ||||||||||| |||||| |||| Sbjct 18839 TCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACACGGGAGACCAGGGTTCAATTC 18780 Query 11789 CCCGACGAGGAGG 11801 || |||| ||||| Sbjct 18779 CCAGACGGGGAGG 18767 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| |||| |||| | |||||| ||||||||||| |||| |||||||| | ||||||| Sbjct 18768 CTCCCCGTCTGGGAATTGAACCCTGGTCTCCCGTGTGACAGGCGGGGATACTCACCACTA 18827 Query 139413 TACTAACGAGGAT 139425 ||||||||||||| Sbjct 18828 TACTAACGAGGAT 18840 >seq778271 Length=642 Score = 91.5 bits (100), Expect = 2e-13 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || ||||||||||||||||||| ||||| |||| ||||| | |||||||||||||||||| Sbjct 65 TAGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 6 Query 8715 TTCCC 8719 ||||| Sbjct 5 TTCCC 1 Score = 89.7 bits (98), Expect = 7e-13 Identities = 59/64 (92%), Gaps = 1/64 (2%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 ||||||||||||||||||||| ||||| |||| ||||| | ||||||||||||||||||| Sbjct 64 AGTCCTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGAT 5 Query 11787 TCCC 11790 |||| Sbjct 4 TCCC 1 >seq2775 Length=875267 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 || |||||||||||||||| ||||| |||| |||||| ||||||||||||||||||||| Sbjct 821617 TCTTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCGTGCGGGAGACCGGGGTTCGATTC 821558 Query 8718 CCCGACGAGGAG 8729 | || | |||| Sbjct 821557 TCTGATGGGGAG 821546 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 || |||||||||||||||| ||||| |||| |||||| ||||||||||||||||||||| Sbjct 821617 TCTTCGTTAGTATAGTGGTGAGTATCCCCGCCTGTCGTGCGGGAGACCGGGGTTCGATTC 821558 Query 11789 CCCGACGAGGAGG 11801 | || | ||||| Sbjct 821557 TCTGATGGGGAGG 821545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 646012950539760