Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq2112 89.7 1e-12 >seq2112 Length=273871 Score = 89.7 bits (98), Expect = 1e-12 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 131864 GTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGG 131923 || || |||||| ||||||||| || ||||| || || |||| |||||| || ||| Sbjct 175467 GTGGCCTTTGCTGCTGTTGAAGGAATTTTCTTCTCGGGATCTTTTGCTGCTATATTCTGG 175526 Query 131924 CTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGAT 131983 || ||||| | ||| | |||||||||||| | || |||||| | ||||| |||||| Sbjct 175527 CTAAAGAAAAGAGGACTCATGCCTGGACTCACTTTTTCCAATGAGCTCATCAGCAGAGAT 175586 Query 131984 GAAG 131987 |||| Sbjct 175587 GAAG 175590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1174082623476019