Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08]
837,179 sequences; 2,878,133,036 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq9815 161 1e-34
seq5931 158 1e-33
seq2775 158 1e-33
seq10000 143 3e-29
seq25612 140 4e-28
seq308 138 1e-27
seq7597 134 2e-26
seq12619 120 3e-22
seq6385 109 6e-19
seq23701 107 2e-18
seq115256 100 3e-16
seq8572 93.3 5e-14
seq25603 87.8 2e-12
seq7427 82.4 9e-11
>seq9815
Length=175929
Score = 161 bits (178), Expect = 1e-34
Identities = 172/227 (76%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || || || ||||| || ||||| ||||| ||| |
Sbjct 59598 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAGCCGTCG 59657
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | |||| | ||||| || || ||||| || || ||||||||||| ||||||
Sbjct 59658 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGACCAG 59717
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || |||||||| |||||||| || |||| ||||| | | ||||| ||
Sbjct 59718 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGGCGTACTTTGTCTGACTACAAC 59777
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| ||||||||||||||||| || | ||||| |||||
Sbjct 59778 ATTCAAAAGGAGTCCACTCTTCATCTAGTGTTAAGACTTCGTGGTGG 59824
>seq5931
Length=560455
Score = 158 bits (174), Expect = 1e-33
Identities = 172/227 (76%), Gaps = 1/227 (0%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| || || || ||||| || ||||||||||| ||| |
Sbjct 199498 ATGCAGATTTTTGTGAAGACCCTGACAGGGAAGACCATCACTCTTGAGGTGGAGCCCTCG 199439
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | |||| | ||||| || || ||||| ||||| ||||||||| | |||||
Sbjct 199438 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTTCTTACCAG 199379
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || || ||||| |||||||| || |||| ||||| | | | ||| ||
Sbjct 199378 CAAGGACTGATCTTAGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTG-CTACAAC 199320
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| ||||||||||||||||| ||| | ||||| |||||
Sbjct 199319 ATTCAAAAGGAGTCCACTCTTCATCTAGTGTTGAGACTTCGTGGTGG 199273
>seq2775
Length=875267
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| || || || ||||| || ||||| ||||| || |
Sbjct 378192 ATGCAGATTTTTGTGAAGACTCTGACGGGGAAGACCATCACTCTCGAGGTCAAGCCCTCG 378251
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | |||| | ||||| || || ||| | ||||| ||||||||||| ||||||
Sbjct 378252 GATACCATAGAAAATGTAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGACCAG 378311
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || |||||| | |||||||| || |||| ||||| | | ||||| ||
Sbjct 378312 CAAAGACTGATCTTTGCTTGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAAC 378371
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| |||||||||||||| || ||| | ||| | |||||
Sbjct 378372 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTTGTGGTGG 378418
>seq10000
Length=929206
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || || ||||| ||| | ||
Sbjct 685752 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 685811
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || ||||||| || || ||||| ||||| || ||||| || ||||||
Sbjct 685812 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 685871
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || ||||| || || |||| || || || | || || ||
Sbjct 685872 CAGCGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 685931
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || || || || || || ||| | ||||| | |||||
Sbjct 685932 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGG 685978
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || || ||||| ||| | ||
Sbjct 685980 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 686039
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || ||||||| || || ||||| ||||| || ||||| || ||||||
Sbjct 686040 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 686099
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || ||||| || || |||| || || || | || || ||
Sbjct 686100 CAGCGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 686159
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || || || || || || ||| | ||||| | |||||
Sbjct 686160 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGG 686206
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || || ||||| ||| | ||
Sbjct 686208 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 686267
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || ||||||| || || ||||| ||||| || ||||| || ||||||
Sbjct 686268 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 686327
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || ||||| || || |||| || || || | || || ||
Sbjct 686328 CAGCGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 686387
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || || || || || || ||| | ||||| | |||||
Sbjct 686388 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGG 686434
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || || ||||| ||| | ||
Sbjct 686436 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 686495
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || ||||||| || || ||||| ||||| || ||||| || ||||||
Sbjct 686496 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 686555
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || ||||| || || |||| || || || | || || ||
Sbjct 686556 CAGCGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 686615
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || || || || || || ||| | ||||| | |||||
Sbjct 686616 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGG 686662
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || || ||||| ||| | ||
Sbjct 686664 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 686723
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || ||||||| || || ||||| ||||| || ||||| || ||||||
Sbjct 686724 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 686783
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || ||||| || || |||| || || || | || || ||
Sbjct 686784 CAGCGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 686843
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || || || || || || ||| | ||||| | |||||
Sbjct 686844 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGG 686890
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || || ||||| ||| | ||
Sbjct 686892 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 686951
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || ||||||| || || ||||| ||||| || ||||| || ||||||
Sbjct 686952 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 687011
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || ||||| || || |||| || || || | || || ||
Sbjct 687012 CAGCGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 687071
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || || || || || || ||| | ||||| | |||||
Sbjct 687072 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGG 687118
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || || ||||| ||| | ||
Sbjct 687120 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 687179
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || ||||||| || || ||||| ||||| || ||||| || ||||||
Sbjct 687180 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 687239
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || ||||| || || |||| || || || | || || ||
Sbjct 687240 CAGCGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 687299
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || || || || || || ||| | ||||| | |||||
Sbjct 687300 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGG 687346
Score = 143 bits (158), Expect = 3e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| |||||||| || ||||||||||| || || || ||||| ||| | ||
Sbjct 687348 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 687407
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || ||||||| || || ||||| ||||| || ||||| || ||||||
Sbjct 687408 GACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCAG 687467
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| || || ||||| || ||||| || || |||| || || || | || || ||
Sbjct 687468 CAGCGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 687527
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || || || || || || ||| | ||||| | |||||
Sbjct 687528 ATCCAGAAAGAGTCGACCCTGCACCTGGTCCTTCGTCTGAGGGGTGG 687574
Score = 141 bits (156), Expect = 1e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || ||||| || ||||||||||| || || | ||||| ||| | |
Sbjct 685523 AATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCTTGGAGGTGGAGCCCAG 685582
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||| | || ||||||| || || ||||| ||||| || ||||| || |||||
Sbjct 685583 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCA 685642
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||| || || ||||| || ||||| || || |||| || || || | || || ||
Sbjct 685643 GCAGCGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 685702
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || || || || || || ||| | ||||| | |||||
Sbjct 685703 CATCCAGAAAGAGTCGACCCTGCACCTGGTCCTCCGTCTGAGGGGTGG 685750
>seq25612
Length=49760
Score = 140 bits (154), Expect = 4e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| | || || | |||||||| ||||| |||||||| ||| | ||
Sbjct 24879 ATGCAGATCTTTGTGACGATCCTGATGGGCAAGACCATTACCCTTGAGGTCGAGCCCAGT 24938
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | || || ||| | ||||| ||||| || ||||||||||| ||||| || ||||
Sbjct 24939 GACACCACTGAGAATGTCAAGGCCAAAATCCAAGACAAGGAGGGCATTCCGCCTGACCGA 24998
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| ||||| || || | || || ||| ||| | || | | ||||||| |||
Sbjct 24999 CAGCGTCTGATTTTCGCAGGCACACAGCTGGAGAATGGCTGCACTCCATCAGACTACAAT 25058
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || ||||| || || | || | ||||| || |||||
Sbjct 25059 ATCCAGAAAGAGTCCACCCTGCACATGGTGCTTCGTCTGCGAGGTGG 25105
>seq308
Length=189498
Score = 138 bits (152), Expect = 1e-27
Identities = 167/227 (74%), Gaps = 4/227 (2%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || || ||||| || | || ||||| || | ||| |||| ||| |
Sbjct 116114 ATGCAGATTTTCGTGAAGACCCTGATGGGGAAGACCATCATTCTCAAGGTGGAGCCCTCG 116055
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| | | |||| | ||||| || || ||||| ||||| ||||||||||| ||||||
Sbjct 116054 GATACAAAAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCAG 115995
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || || |||||||| |||||||| || |||| ||||| | ||||| ||
Sbjct 115994 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTT----GACTACAAC 115939
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
| |||||||| |||||||||||||||| ||| | |||| |||||
Sbjct 115938 ATTCAAAAGGAGCCCACTCTTCATCTAGTGTTGAGACTTCATGGTGG 115892
>seq7597
Length=568930
Score = 134 bits (148), Expect = 2e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| | ||||| ||||| || || || ||||| ||| | ||
Sbjct 229864 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 229923
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||||| || || || ||||||||||| || || |||||||||
Sbjct 229924 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 229983
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || ||||| || || || || || |||| || ||||| | ||||| ||
Sbjct 229984 CAGAGGTTGATCTTTGCGGGGAAACAGCTGGAAGATGGGCGCACCCTGTCCGACTACAAC 230043
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || |||||||| || || ||| | || || | |||||
Sbjct 230044 ATCCAGAAAGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 230090
Score = 129 bits (142), Expect = 7e-25
Identities = 179/247 (72%), Gaps = 3/247 (1%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| ||||| || ||||| | ||||| ||||| || || || ||||| ||| | ||
Sbjct 230092 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 230151
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||||| || || || ||||||||||| || || |||||||||
Sbjct 230152 GACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAG 230211
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| | | || ||||| || || || || || |||| || ||||| | ||||| ||
Sbjct 230212 CAGAGGTTGATCTTTGCGGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 230271
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAAGTTTAAAGT 27645
|||| || || || ||||| || | ||| |||| ||| | || ||| |||| ||||
Sbjct 230272 ATCCAGAAAGAGTCTACTCTGCACTTGGTCCTGCG-CTT-GAGG-GGAGGTGTTTTAAGT 230328
Query 27646 TTTTCCT 27652
| | |||
Sbjct 230329 TCTCCCT 230335
Score = 123 bits (136), Expect = 3e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| |||||||| || || || || || || || || ||||| ||||| ||| | |
Sbjct 229635 AATGCAGATCTTTGTAAAAACCCTAACTGGTAAAACCATCACTCTGGAGGTGGAGCCTAG 229694
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||| | ||| | |||| || || || || || || || || |||||||||||
Sbjct 229695 TGACACCATCGAGAATGTCAAGGGGAAGATCCAAGAAAAAGAAGGCATCCCTCCAGACCA 229754
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||| | | || ||||| || || || || || |||| || ||||| | ||||| ||
Sbjct 229755 GCAGAGGTTGATCTTTGCAGGCAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 229814
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| || || |||||||| || || ||| | || || | |||||
Sbjct 229815 CATCCAGAAAGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 229862
>seq12619
Length=221303
Score = 120 bits (132), Expect = 3e-22
Identities = 167/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 27400 ACTATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAG 27459
|| || ||||| || || | ||||| || || || |||| || ||||| |||| ||
Sbjct 122900 ACCATGATGCAGATTTTCATGAAGACCCTGACAGGTAAGAGCATCTCTCTTAAGGTCAAG 122959
Query 27460 TCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCA 27519
| |||| || | |||| | ||||| || || ||||| ||||| ||| ||||| |
Sbjct 122960 CCCTTGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAGTTCCTTCT 123019
Query 27520 GACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGAC 27579
|||||||| | || || || |||| |||||||| || |||| || | | | ||
Sbjct 123020 GACCAGCAAAGACTGATCGTTACTGGCAAGCAACTGGAAGATGGATGTCCTTTGTCTAAC 123079
Query 27580 TATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633
|| ||| | |||||||| |||||||||||||| || ||| | | ||| ||||||
Sbjct 123080 TACAATATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACGTCGTGGTGGA 123133
>seq6385
Length=214227
Score = 109 bits (120), Expect = 6e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || | ||||| || || | ||||| || ||| | ||||| ||| |
Sbjct 138609 ATGCAGATTTTCATGAAGACCCTAACAGTGAAGACCATCACTATCGAGGTCGAGCCCTCG 138668
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| || | |||| | ||||| || || ||||| ||||| || |||||||| ||||||
Sbjct 138669 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGGATTCCTCCTGACCAG 138728
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|| | || | |||||||| |||||||| || |||| |||| | | ||||| ||
Sbjct 138729 CAAAGACTGACCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTACAAC 138788
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618
||||| | ||||||||||||| || |||
Sbjct 138789 ACTGAAAAGCAGCCCACTCTTCATCTTGTGTTG 138821
>seq23701
Length=42229
Score = 107 bits (118), Expect = 2e-18
Identities = 153/220 (70%), Gaps = 19/220 (9%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || ||||| ||||| || | || ||||| || ||||||||||||||| |
Sbjct 17008 ATGCAGATTTTTGTGAAGACCCTGATGGGGAAGACCATCACTCTTGAGGTTGAGCCCTCG 16949
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| | | |||| | ||||| || || ||| | ||||| ||||||||||| |||
Sbjct 16948 GATACAACAGAAAATGTAAAGGCCAAGATCCAGAATAAGGAAGGAATTCCTCCTGAC--- 16892
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||| |||||||| || |||| |||| | | ||||| ||
Sbjct 16891 ----------------CTGGCAAGCAACTAGAAGATGGATGTACTTTGTCTGACTACAAC 16848
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTC 27625
| |||||||| ||||||||||||||||| ||| | ||||
Sbjct 16847 ATTCAAAAGGAGTCCACTCTTCATCTAGTGTTGAGACTTC 16808
>seq115256
Length=201
Score = 100 bits (110), Expect = 3e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||||||||| || ||||| || ||||||||||| || || | ||||| ||| | |
Sbjct 77 AATGCAAATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCTTGGAGGTGGAGCCCAG 136
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
||| | ||| | || ||||||| || || ||||| ||||| || ||||| || |||||
Sbjct 137 TGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCA 196
Query 27525 GCAGC 27529
|||||
Sbjct 197 GCAGC 201
>seq8572
Length=335338
Score = 93.3 bits (102), Expect = 5e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| ||||| || ||||||||||| || || |||||||| ||| | ||
Sbjct 220453 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 220512
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509
|| | ||||| ||| | || || ||||| || |||||||||||
Sbjct 220513 GACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGG 220556
>seq25603
Length=112400
Score = 87.8 bits (96), Expect = 2e-12
Identities = 142/203 (70%), Gaps = 1/203 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| |||||||| || || || || || ||||| | || |||||||||| | ||
Sbjct 46969 ATGCAGATCTTTGTGAAAACCCTAACAGGGAAGACCACCACCTGTGAGGTTGAGCCCAGT 47028
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | | || | || | || || ||||| || ||||||||||| | || || || |||
Sbjct 47029 GACACTACTG-AGATGTCAAAGCCAAAATCCAAGACAAGGAGGGCTTCCCACCTGATCAG 47087
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||| ||| ||||| ||| || || || ||| ||| | | || |||| || |||
Sbjct 47088 CAGAATCTGATTTTCATTGGCAAACAGCTGGAGAATGGCCACAATCTGTCAGAATACAAT 47147
Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608
|||| || || ||||| || ||
Sbjct 47148 ATCCAGAAAGAGTCCACCCTACA 47170
>seq7427
Length=393672
Score = 82.4 bits (90), Expect = 9e-11
Identities = 93/125 (74%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCA 32184
|| ||||| ||| | |||||||||||||| || || ||| | ||||| || ||||
Sbjct 309597 ACTATTGTGAACTTGGCTCAGAACTTTGTGGGGAGCAACAACATCAACTTGCTTCAGCCT 309656
Query 32185 TCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATC 32244
||| |||||||| || ||||| ||| ||||| || ||||| ||| | ||||| ||
Sbjct 309657 ATTGGTCAGTTTGGAACTCGGCTTCACGGGGGCAAAGACGCTGCAAGCCCTCGTTATATT 309716
Query 32245 TTCAC 32249
|||||
Sbjct 309717 TTCAC 309721
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 564342251370480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |