Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq9859 86.0 8e-12 >seq9859 Length=187512 Score = 86.0 bits (94), Expect = 8e-12 Identities = 186/275 (68%), Gaps = 10/275 (4%) Strand=Plus/Minus Query 14277 GACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACG--GGACGC 14334 ||||| || |||||||| || ||||| ||||||||| | ||| | || || ||| || Sbjct 60899 GACACCTATAGCCCCGATGAACACCTCTGGGCCACCCTTCAGCG--TGCACCATGGATGC 60842 Query 14335 CCGGGGGGATCCCCGTTCACGTCAAGTACGACACCTCGGACATGTGGGCCAAGGTCAGGT 14394 | || | ||| ||| |||||| ||| || |||||| |||| | |||| Sbjct 60841 CTGGCTCTGTTCCCTACCACTCCAAGTATCACATTTCAGACATGACTGCCATCGCCAGGC 60782 Query 14395 TCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTGCG 14454 | ||||||||||| | ||||||| ||| | | | ||||| | ||| | |||||| Sbjct 60781 TGGTCAAGTGGCAAGGCCACGAGGGAGATGTTAGCATGGGGGCACCTTACGCACCTTGCT 60722 Query 14455 ACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGG---CTGA 14511 || ||||| | ||||||||||| | ||| |||| ||| || | ||| || Sbjct 60721 CTGGAATCCATCAGCGGGCCATCTGCATTTACGGAGCCGGGGACTTGCACTGGATTCTCC 60662 Query 14512 AGAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546 ||| || ||||| || || |||||||| ||| Sbjct 60661 AGA---ACCATCACCTCTTGGCAAACAAGTTTGAC 60630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 651845667191040