Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq2560 187 2e-42 >seq2560 Length=892758 Score = 187 bits (206), Expect = 2e-42 Identities = 138/161 (86%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||||||||| ||||| |||||||| ||||| |||||||||| |||||||| | |||| Sbjct 722318 GATCTCCCTCTCATGGCCCTCCCCCCATGCCATGCCCTCTGCCAGTTCTACGTGGTGAAT 722377 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||||||||||||| | || ||||| |||||||||||||| | || ||||| ||| Sbjct 722378 GGTGAGCTGTCCTGCCAGTTGTACCAACGGTCGGGAGACATGGGCCTGGGTGTGCCCTTC 722437 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 |||||||| || ||||| |||||||| ||||||||||| || Sbjct 722438 AACATTGCCAGCTACGCCCTGCTCACCTACATGATCGCACA 722478 Score = 187 bits (206), Expect = 2e-42 Identities = 138/161 (86%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| |||||||| ||||| || ||||||||||| ||||| || | ||| Sbjct 722478 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGCACACCCAGGCCC 722419 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||||||||| ||||| || | ||||||||||||||| |||||| | |||||||| ||| Sbjct 722418 ATGTCTCCCGACCGTTGGTACAACTGGCAGGACAGCTCACCATTCACCACGTAGAACTGG 722359 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||||| ||||| |||||||| ||||| ||||||||||| Sbjct 722358 CAGAGGGCATGGCATGGGGGGAGGGCCATGAGAGGGAGATC 722318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443571451652880