Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Okapia_20johnstoni_20[genbank_20GCA_5F001660835.1_202016-06-08] 837,179 sequences; 2,878,133,036 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq790 84.2 3e-11 >seq790 Length=204519 Score = 84.2 bits (92), Expect = 3e-11 Identities = 118/163 (72%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 156179 GTTAGCTTCCGATTCACCCACATATTTGTTTAATAATTCAGGACCGTTAACTATTTTGAC 156238 |||||| || ||||| |||||||||||||| | | ||| || ||||| || | ||| Sbjct 33138 GTTAGCCTCTGATTCTCCCACATATTTGTTGAGAATTTCCGGCCCGTTGACCACTTTAGG 33079 Query 156239 GGGTCGTG-ATTTAAAAGCTTGAGCGATACAGCGAGCCATTAATGTTTTACCGCACCCAG 156297 || || ||| || | |||| | || ||||||| || || |||||||| || | Sbjct 33078 CTCTCTTGCATTCAACATCTTG-CCAATCTGTCGAGCCAATAGAGTCTTACCGCAACCTG 33020 Query 156298 GAGGTCCGTATAACAATACTCCTTTTATATGTTTACAACCTAA 156340 |||| |||||||||| | ||||| | |||||| || ||||| Sbjct 33019 GAGGCCCGTATAACAGGATGCCTTTAACATGTTTGCAGCCTAA 32977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 660094433139240