Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq202 300 2e-76 seq58 185 1e-41 seq166 159 4e-34 seq83 154 2e-32 >seq202 Length=4085823 Score = 300 bits (332), Expect = 2e-76 Identities = 639/942 (68%), Gaps = 14/942 (1%) Strand=Plus/Plus Query 9427 CCATGTTACAAAAGTGACA-CTACGAGACTAGCAGCTCAGGTGGTACCCGCCCTGTATCT 9485 |||||| | ||||| ||| | | ||| || | |||||| | | ||| | |||||| Sbjct 1199137 CCATGTGAAAAAAGCAACATCAAGGAG-CTGGGGGCTCAGTTCCTGCCCCCACTGTATTC 1199195 Query 9486 GCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATA 9545 || ||||| |||| || |||||||| | | |||||| | || ||| || ||| Sbjct 1199196 CCTGGTGTTCACGGTTGGTCTGCTGGGCAATGTAGTGGTGGTGGTGATCCTCACAAAATA 1199255 Query 9546 CATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCT 9605 || ||| || | | || ||||| | ||| | || |||| || || |||||||| Sbjct 1199256 CAACAAGCTCCGGATTATGACCAACATCTACCTGCTCAATCTGGCCATTTCCGACTTGCT 1199315 Query 9606 ATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTT 9665 || | || ||| |||| || ||||| |||||| |||| || | |||| ||| ||| Sbjct 1199316 CTTCTTATTCACTCTGCCGTTCTGGATTCACTATGTTGGG-TGGA--ATGAGTGGGTTTT 1199372 Query 9666 TGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGT 9725 ||| ||||||| ||||| || | | ||||||| ||||||| || | Sbjct 1199373 TGGCCACCATATGTGTAAGTTGCTCTCTGGGCTCTATTACATGGGCTTGTACAGTGAGAT 1199432 Query 9726 CTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC 9785 ||| | |||||| || || || ||||| ||||||| || | || | || || ||| Sbjct 1199433 CTTCTTCATCATACTCCTGACCATAGACCGGTATCTGGCCATCGTGCACGCCGTGTTTGC 1199492 Query 9786 --TTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTG 9843 || ||| | || || | ||| || | || | | | |||||| | ||| Sbjct 1199493 CCTTCGAGCCC--GGACGACCACTTTTGGTATCATCACAAGCATCTTCACCTGGGTCCTG 1199550 Query 9844 GCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGG 9903 |||||||| |||||||||||||| |||| |||| |||||| || || | Sbjct 1199551 GCAGGGTTAGCAGCCCTCCCTGAATTTATCTTCCATGAGTCCCAAGAGGAGTTTGAACAG 1199610 Query 9904 GTTCAGTGTGATCCTTACTACCCAGAGATGTCTACA-AATGTTTGGAGGCGCGCCCACGT 9962 | || |||| |||||| ||| | | | |||| |||| | || ||| | Sbjct 1199611 ACTTTCTGCAGTCCTCTTTACCCAAAGAA-TGGAGAGAATGCCTGGAAGTGCTTCCATGC 1199669 Query 9963 TGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTA 10022 | | | ||| ||| | ||||| | ||||||||||||||||||| ||||||||| Sbjct 1199670 TCTGAGGTTGAATATCCTGGGTCTCGCTCTGCCTCTGCTCATTATGGCCATCTGCTACTC 1199729 Query 10023 TGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCT 10082 | ||| || |||| |||| |||| ||||||| || || || |||||||||||| |||| Sbjct 1199730 AGGAATCATTAGAACACTGCTGAGATGCCCCAGTAAAAAAAAATACAAGGCCATCCGGCT 1199789 Query 10083 CATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCT 10142 ||| |||||||||||||||| || ||| |||| |||||||||||||| | ||| |||| Sbjct 1199790 CATTTTTGTCATCATGGTGGTCTTCTTTATTTTCTGGACACCCTACAATCTGGTTGTCCT 1199849 Query 10143 ACTGTCTACCTTTCACGCAACCCTTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGA 10202 || || || ||||| | ||| | ||| |||||| |||||| | |||| Sbjct 1199850 CCTCTCAACTTTTCAAGTGCACCT--GGAGACTG-AGTGTGAGCAGAGCAGACAGCTGGA 1199906 Query 10203 CATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGAT 10262 | |||| ||||| | || | | |||||||| ||||| || ||||||| ||||| Sbjct 1199907 CCTGGCCATGCTGGTGACGGAGGTGATCGCCTACACCCACTGCTGTGTCAACCCCGTGAT 1199966 Query 10263 CTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGT 10322 |||||| ||||| || |||| ||| || ||||| |||||| ||| ||| | || Sbjct 1199967 CTACGCCTTCGTTGGTGAGAGGTTCCAAAAGCACCTCCGCCACTTTTTCTACAGGCATGT 1200026 Query 10323 GGCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTGGTGA 10364 |||||||||| | |||| | |||||| || || || |||| Sbjct 1200027 GGCCATCTACATGGGCAAATTCATCCCATTTCTTCCTAGTGA 1200068 Score = 300 bits (332), Expect = 2e-76 Identities = 639/942 (68%), Gaps = 14/942 (1%) Strand=Plus/Plus Query 176313 CCATGTTACAAAAGTGACA-CTACGAGACTAGCAGCTCAGGTGGTACCCGCCCTGTATCT 176371 |||||| | ||||| ||| | | ||| || | |||||| | | ||| | |||||| Sbjct 1199137 CCATGTGAAAAAAGCAACATCAAGGAG-CTGGGGGCTCAGTTCCTGCCCCCACTGTATTC 1199195 Query 176372 GCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTCATAAGATA 176431 || ||||| |||| || |||||||| | | |||||| | || ||| || ||| Sbjct 1199196 CCTGGTGTTCACGGTTGGTCTGCTGGGCAATGTAGTGGTGGTGGTGATCCTCACAAAATA 1199255 Query 176432 CATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCTGACTTGCT 176491 || ||| || | | || ||||| | ||| | || |||| || || |||||||| Sbjct 1199256 CAACAAGCTCCGGATTATGACCAACATCTACCTGCTCAATCTGGCCATTTCCGACTTGCT 1199315 Query 176492 ATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTATCATGATTGGACTTT 176551 || | || ||| |||| || ||||| |||||| |||| || | |||| ||| ||| Sbjct 1199316 CTTCTTATTCACTCTGCCGTTCTGGATTCACTATGTTGGG-TGGA--ATGAGTGGGTTTT 1199372 Query 176552 TGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTACAGCCAGGT 176611 ||| ||||||| ||||| || | | ||||||| ||||||| || | Sbjct 1199373 TGGCCACCATATGTGTAAGTTGCTCTCTGGGCTCTATTACATGGGCTTGTACAGTGAGAT 1199432 Query 176612 CTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGCTGTAACTGC 176671 ||| | |||||| || || || ||||| ||||||| || | || | || || ||| Sbjct 1199433 CTTCTTCATCATACTCCTGACCATAGACCGGTATCTGGCCATCGTGCACGCCGTGTTTGC 1199492 Query 176672 --TTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACCTGGTTTCTG 176729 || ||| | || || | ||| || | || | | | |||||| | ||| Sbjct 1199493 CCTTCGAGCCC--GGACGACCACTTTTGGTATCATCACAAGCATCTTCACCTGGGTCCTG 1199550 Query 176730 GCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGACAATGGTAGG 176789 |||||||| |||||||||||||| |||| |||| |||||| || || | Sbjct 1199551 GCAGGGTTAGCAGCCCTCCCTGAATTTATCTTCCATGAGTCCCAAGAGGAGTTTGAACAG 1199610 Query 176790 GTTCAGTGTGATCCTTACTACCCAGAGATGTCTACA-AATGTTTGGAGGCGCGCCCACGT 176848 | || |||| |||||| ||| | | | |||| |||| | || ||| | Sbjct 1199611 ACTTTCTGCAGTCCTCTTTACCCAAAGAA-TGGAGAGAATGCCTGGAAGTGCTTCCATGC 1199669 Query 176849 TGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCTGTCTGCTACTA 176908 | | | ||| ||| | ||||| | ||||||||||||||||||| ||||||||| Sbjct 1199670 TCTGAGGTTGAATATCCTGGGTCTCGCTCTGCCTCTGCTCATTATGGCCATCTGCTACTC 1199729 Query 176909 TGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCT 176968 | ||| || |||| |||| |||| ||||||| || || || |||||||||||| |||| Sbjct 1199730 AGGAATCATTAGAACACTGCTGAGATGCCCCAGTAAAAAAAAATACAAGGCCATCCGGCT 1199789 Query 176969 CATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAACATTGTTCTCCT 177028 ||| |||||||||||||||| || ||| |||| |||||||||||||| | ||| |||| Sbjct 1199790 CATTTTTGTCATCATGGTGGTCTTCTTTATTTTCTGGACACCCTACAATCTGGTTGTCCT 1199849 Query 177029 ACTGTCTACCTTTCACGCAACCCTTCTTAACCTGCAGTGTGCATTGAGCAGTAACTTGGA 177088 || || || ||||| | ||| | ||| |||||| |||||| | |||| Sbjct 1199850 CCTCTCAACTTTTCAAGTGCACCT--GGAGACTG-AGTGTGAGCAGAGCAGACAGCTGGA 1199906 Query 177089 CATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGCATCAACCCAGTGAT 177148 | |||| ||||| | || | | |||||||| ||||| || ||||||| ||||| Sbjct 1199907 CCTGGCCATGCTGGTGACGGAGGTGATCGCCTACACCCACTGCTGTGTCAACCCCGTGAT 1199966 Query 177149 CTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGT 177208 |||||| ||||| || |||| ||| || ||||| |||||| ||| ||| | || Sbjct 1199967 CTACGCCTTCGTTGGTGAGAGGTTCCAAAAGCACCTCCGCCACTTTTTCTACAGGCATGT 1200026 Query 177209 GGCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTGGTGA 177250 |||||||||| | |||| | |||||| || || || |||| Sbjct 1200027 GGCCATCTACATGGGCAAATTCATCCCATTTCTTCCTAGTGA 1200068 Score = 116 bits (128), Expect = 4e-21 Identities = 242/355 (68%), Gaps = 9/355 (3%) Strand=Plus/Plus Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051 |||| ||||| | ||| |||||||||| | ||| | | || ||| | || | | Sbjct 1289678 TGCCACTGCTTGTCATGATCGTCTGCTACTCGGGAATCCTAAAAACCCTGCTTCGGTGTC 1289737 Query 10052 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 10108 || | ||||||||| |||||||| | ||||||||||||| | ||||| | | ||| | Sbjct 1289738 GCAACGAGAAGAAGAAGCACAAGGCCGTGAGGCTCATCTTTGCCGTCATGATTGTCTACT 1289797 Query 10109 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTC 10168 || | || ||| | ||||||||||| || || || ||| ||||| || | || || Sbjct 1289798 TTCTCTTCTGGGCTCCCTACAACATCGTCCTTCTTCTGAGCACCTTCCA-GGAATTCT-- 1289854 Query 10169 TTAACCTGCA-GTGTGCATTGA--GCAGTAACTTGGACATGGCTCTGCTGATAACAAAAA 10225 || |||| | |||| ||| | || ||||| || ||| | | ||| | | Sbjct 1289855 TTGGCCTGAATAACTGCAGTGACTCTAATAGGCTGGACCAAGCCATGCAGGTGACAGAGA 1289914 Query 10226 CAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGT 10285 | | | |||||||| ||||||||||| | |||||||| ||||| |||||||||| Sbjct 1289915 CCCTGGGGATGACACACTGCTGCATCAACCCCATCATCTACGCCTTCGTCGGGGAGAAGT 1289974 Query 10286 TTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 10340 | |||| | || | || ||||||| | |||| |||| | | ||||||| Sbjct 1289975 TCCGAAGCTATCTCTTACAGTTCTTCCGAAAGCACGTTGCCAGATGCTTCTGCAA 1290029 Score = 116 bits (128), Expect = 4e-21 Identities = 242/355 (68%), Gaps = 9/355 (3%) Strand=Plus/Plus Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937 |||| ||||| | ||| |||||||||| | ||| | | || ||| | || | | Sbjct 1289678 TGCCACTGCTTGTCATGATCGTCTGCTACTCGGGAATCCTAAAAACCCTGCTTCGGTGTC 1289737 Query 176938 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 176994 || | ||||||||| |||||||| | ||||||||||||| | ||||| | | ||| | Sbjct 1289738 GCAACGAGAAGAAGAAGCACAAGGCCGTGAGGCTCATCTTTGCCGTCATGATTGTCTACT 1289797 Query 176995 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTC 177054 || | || ||| | ||||||||||| || || || ||| ||||| || | || || Sbjct 1289798 TTCTCTTCTGGGCTCCCTACAACATCGTCCTTCTTCTGAGCACCTTCCA-GGAATTCT-- 1289854 Query 177055 TTAACCTGCA-GTGTGCATTGA--GCAGTAACTTGGACATGGCTCTGCTGATAACAAAAA 177111 || |||| | |||| ||| | || ||||| || ||| | | ||| | | Sbjct 1289855 TTGGCCTGAATAACTGCAGTGACTCTAATAGGCTGGACCAAGCCATGCAGGTGACAGAGA 1289914 Query 177112 CAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGT 177171 | | | |||||||| ||||||||||| | |||||||| ||||| |||||||||| Sbjct 1289915 CCCTGGGGATGACACACTGCTGCATCAACCCCATCATCTACGCCTTCGTCGGGGAGAAGT 1289974 Query 177172 TTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 177226 | |||| | || | || ||||||| | |||| |||| | | ||||||| Sbjct 1289975 TCCGAAGCTATCTCTTACAGTTCTTCCGAAAGCACGTTGCCAGATGCTTCTGCAA 1290029 >seq58 Length=13669011 Score = 185 bits (204), Expect = 1e-41 Identities = 138/162 (85%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 |||||||||| ||| |||| ||||||||| ||||||| ||||||||| |||||||||||| Sbjct 13148014 AGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 13147955 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||| || || | |||||||||||||||||| ||||| ||| | || Sbjct 13147954 ACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTTCACC 13147895 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 |||||||||||||| ||| ||||| || || ||||||||| Sbjct 13147894 ACGTAGAACTGGCAAAGGGCATGGCACGGGGGTAGGGCCATG 13147853 >seq166 Length=5848183 Score = 159 bits (176), Expect = 4e-34 Identities = 131/157 (83%), Gaps = 3/157 (2%) Strand=Plus/Minus Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141 || ||||||||||||| ||||||||| || ||||| ||||||||||||||||| | || Sbjct 2344389 CAACGCCTCAGCCTCAGCCTGAGGGTCTTCAGCTTCTCCCCCAGGGAGTTCACGTGCTC- 2344331 Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201 ||| || | || || |||| ||| |||| |||||||||||||| |||||||||||| Sbjct 2344330 -TTTGATGTTGGG-GCCATGGTCCTCAGCCTTCGGCATCACCTCCTCTAGGTAAAACTGG 2344273 Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 |||||||| |||| ||| ||||| ||||||||||||| Sbjct 2344272 ATCATCTCCGACAAGGCTTGGCAACCCAGGTAACCCT 2344236 Score = 131 bits (144), Expect = 2e-25 Identities = 86/95 (91%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 |||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||| Sbjct 2346682 TCAGTTTTTCATCTTTGTTGTCATGTAGGCTTCTATGTAGTTGATGAAGATGTCAAACTC 2346623 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||| |||||||| || || || ||||||| Sbjct 2346622 ACTCATGGCTTTGTAGACACCCTTCTCTTGGAGCT 2346588 >seq83 Length=9572586 Score = 154 bits (170), Expect = 2e-32 Identities = 242/341 (71%), Gaps = 4/341 (1%) Strand=Plus/Plus Query 145567 TGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACC 145626 ||||| |||||| || | | |||||| || ||| |||||||||| || | ||| || Sbjct 1005399 TGGGGACTGTAGCCTTCAATCTGAAAGTCTTCAGCCTTGAAGTCATCGATTTTCTCAACT 1005458 Query 145627 CGCCTCAGGATCCTGAGCCT-GGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAG 145685 | ||||| ||||| | |||||||| | | |||| | ||||| | ||||| Sbjct 1005459 TTTCCAAGGATTTTGAGCTTTGGGAAAGGCCTTGATTCTCCCTGA-AGCTGCATTTTCAG 1005517 Query 145686 GGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGG 145745 |||| | ||| | ||||| | || || || |||| ||| | |||| || || Sbjct 1005518 CAGCTCAATGTGATCCAGGTAAATATGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGG 1005577 Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805 || ||||| |||| ||| |||| ||||||||| ||||||| |||||||| |||||||| Sbjct 1005578 CTTCAGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAA 1005637 Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCC 145865 || ||| | ||| ||| ||| || || | ||||||||||| |||||| || || | Sbjct 1005638 GGACACACTCAGGCCCCCGTCTCCTGACCTCTGGTACAGCT-GCAGGACAG-TCATGGTT 1005695 Query 145866 CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGG 145906 | ||||||||| ||||| ||| ||||| | ||||||| Sbjct 1005696 CATCACGTAGAAGTGGCAAAGGGCATGGCACAGGGGCAGGG 1005736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590064496898720