Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq27 89.7 8e-13 >seq27 Length=17078927 Score = 89.7 bits (98), Expect = 8e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || ||||| || || || ||| | || ||||| | Sbjct 16540134 ATGCAGATTTTCAGGAAGACCCTGACAGGGAAGACCATCACTCTCAAGGTTGAACCTTCA 16540075 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 |||||||| ||| |||| || || |||||||||||||| || || ||||| || Sbjct 16540074 GATACAATAGAAAATGTAAAGGCCAAGATCCAAGATAAAGAAGGAATCCCTCCTGACCAG 16540015 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| || || ||||| || || ||| | |||||| | | || || || || || Sbjct 16540014 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAGGATGGCCATACTTTGTCTGACTACAAC 16539955 Query 124719 ATTCAAAAAGAATC 124732 |||||||| || || Sbjct 16539954 ATTCAAAAGGAGTC 16539941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755440248742400