Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq64 2048 0.0 seq80 95.1 8e-15 >seq64 Length=11759315 Score = 2048 bits (2270), Expect = 0.0 Identities = 1486/1727 (86%), Gaps = 46/1727 (3%) Strand=Plus/Plus Query 107068 CCAG-TCCTAACTCCAGTCCCAGCATGACTAGCTGGTTTGCAGCATCAGGTTACAGATGT 107126 |||| |||| | |||||| ||||||||| |||||||||| || ||||| || ||| | Sbjct 6264315 CCAGATCCTGATTCCAGTGCCAGCATGATCAGCTGGTTTGTAGTGTCAGGCTATAGACCT 6264374 Query 107127 CCATC-------------CACAAGGGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTA 107173 ||||| || | | || |||||||||||||||||||| |||||||||| Sbjct 6264375 CCATCAGTGAGCTGGGTGCATGAAGTTCCTAGGCAGGACTTGACTGAGGGTATTTGTCTA 6264434 Query 107174 TAGAAGACATCTATCTTTACCATCACTCTGGAGTTGAACTTGA-------------TGTT 107220 |||||| | || | ||| |||||||| ||||||| ||||||| |||| Sbjct 6264435 GAGAAGAAACCTGTTTTTGCCATCACTTTGGAGTTCAACTTGAAGATCCTTGAGCATGTT 6264494 Query 107221 CTGGATTAGTTTGTAATTAAAGGCATTTTGTTCTGTCCAAGGATCTCCTCCTCCACCTTG 107280 | | ||||||||||| | ||||||||||||||||||||||||| || |||||| |||| Sbjct 6264495 CCAGGTTAGTTTGTAACTGAAGGCATTTTGTTCTGTCCAAGGATTTCATCCTCCTCCTTC 6264554 Query 107281 CCTGTGCCCAAACTCTCCTGATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGC 107340 |||||||||||||||| | |||||||||| ||||||||||| ||||||||||||||||| Sbjct 6264555 CCTGTGCCCAAACTCTACCGATCTCCCATTCCATGAAGATGATTGGGTGGAAGAAGAAGC 6264614 Query 107341 TTTGCCGGGGACATCATCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTC 107400 | ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct 6264615 TCTGCAGGGGGCATCACCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTGCTC 6264674 Query 107401 TGAGACTTTCCCTCAGGTTTAAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACT 107460 |||||||||| |||||||| |||||||| || ||||| |||||||||| |||||||||| Sbjct 6264675 TGAGACTTTCTCTCAGGTTAAAATGTGACATACATTCCCTGGATCTGGAATCCAGGGACT 6264734 Query 107461 TCCAGAGTCAGCACTGTAGGGACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGAT 107520 | | || |||| |||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 6264735 TTCGAAGCCAGCGCTGTAGGGACATCTTGTACAACTCCCTGAAGCTGCCAGCAAAGAGAT 6264794 Query 107521 CCATCAACTGTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAG 107580 ||||||||||||||||| |||| |||||||||||||||||||||||| |||| ||||| | Sbjct 6264795 CCATCAACTGTTCTGGGGTCACCCGAGGGGACCAGGAAGCAGTGGTCAAGGCTCTCCTGG 6264854 Query 107581 ACAACCTGGAAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAA 107640 |||| ||||| || ||||| |||||| |||| |||| | |||| ||||||||||||| | Sbjct 6264855 ACAATCTGGAGGTCAAGAAGAAGCGGGAGCCTTTCACAGACACCGATTACCTCAACATGA 6264914 Query 107641 CCAGAGACTGTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAG 107700 ||||||| ||||||| || ||| ||||||||||||||||||||||||||||||| |||| Sbjct 6264915 CCAGAGATTGTGAGCAGTTTAAGTCCCAAAGGAAGTTCATACAGTTCCCACTGAGCAAAG 6264974 Query 107701 AAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTG 107760 ||||| ||||||||||||| || ||||| ||||||||||||||||| |||||||||||| Sbjct 6264975 AAGAGTTAGACTTCCCCATCGCATACTCTGTGGTGGTCCATGAGAAGGTTGAAAACTTTG 6265034 Query 107761 AACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGA 107820 |||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| || Sbjct 6265035 AACGGCTGCTGCGAGCTGTGTATGCCCCTCAGAACATATACTGCGTCCATGTGGATGAGA 6265094 Query 107821 AGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCT 107880 |||||||||| |||||||||||||| |||| ||||||||||||||||||||| ||||||| Sbjct 6265095 AGTCCCCAGAAACTTTCAAAGAGGCAGTCAGGGCCATTATTTCCTGCTTCCCAAATGTCT 6265154 Query 107881 TCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACC 107940 ||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||| Sbjct 6265155 TCATGGCCAGTAAGTTGGTCCGAGTGGTTTACGCCTCCTGGTCCAGGGTGCAGGCTGACC 6265214 Query 107941 TGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACAT 108000 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 6265215 TGAACTGTATGGAAGACTTGCTCCAGAGCTCGGTGCCATGGAAATACTTACTGAATACAT 6265274 Query 108001 GCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGA 108060 | |||||||| || || |||||||||||||| |||| |||||||||||||||||||||| Sbjct 6265275 GTGGGACAGATTTTCCTATAAAGACCAATGCTGAGACAGTCCTGGCCCTCAAGATGTTGA 6265334 Query 108061 AGGGTAAGAACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAAT 108120 | || ||||||||||||||||| ||| ||||| |||||| |||||| ||||||||||| Sbjct 6265335 ATGGGAAGAACAGTATGGAGTCCGAGATACCTACTGAGTACAAAAAGTCTCGCTGGAAAT 6265394 Query 108121 ACCGCTATGAGGTGACAGACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTG 108180 ||| |||||||||||||||||| || ||| |||||||||||||||||||||||||||| Sbjct 6265395 ACCACTATGAGGTGACAGACACGTTGCACCTAACCAGCAAGATGAAGGACCCTCCCCCTG 6265454 Query 108181 ATAATTTACCCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAAC 108240 |||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 6265455 ATAACTTACCCGTGTTCACAGGGAATGCCTATTTTGTGGCTTCTCGAGCCTTTGTCCAAC 6265514 Query 108241 ATGTCTTAGACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCC 108300 |||||||||| ||||| ||||||||| ||||| | ||||||| |||||||||||||||| Sbjct 6265515 ATGTCTTAGAGAACCCCAAATCCCAACGACTGATCGAATGGGCAAAAGACACCTATAGCC 6265574 Query 108301 CCGACGAACACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTA 108360 |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 6265575 CCGATGAACACCTCTGGGCCACCCTTCAGCGTGCACCGTGGATGCCTGGCTCTGTCCCCT 6265634 Query 108361 GCCACCCCAAGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGT 108420 |||||| |||| |||||||||||||||||| ||||| |||||||| ||||| ||||||| Sbjct 6265635 ACCACCCGAAGTTTCACATCTCAGACATGACCGCCATTGCCAGGCTGGTCAAATGGCAGT 6265694 Query 108421 ACCACGAGGGAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGA 108480 |||||||||||| |||| |||||||| ||||||||||| |||||||||||||| | | Sbjct 6265695 TCCACGAGGGAGACATCAGTATGGGGGCACCTTATGCACCTTGCTCTGGAATCCACCAGC 6265754 Query 108481 GGGCCATCTGCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCT 108540 |||| ||||||||||| ||||| ||||||||| |||||||||| |||| |||||||||| Sbjct 6265755 GGGCTATCTGCATTTATGGGGCTGGGGACCTGCACTGGATTCTTCAGAGTCATCACCTCT 6265814 Query 108541 TGGCAAACAAGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACC 108600 |||| |||||||||||||| | ||||||||||||||| |||||||| ||||||||||| Sbjct 6265815 TGGCGAACAAGTTTGACCCAAAGGTGGATGATAACGTTCTGCAGTGTTTAGAAGAGTATT 6265874 Query 108601 TACGTCATAAGGCCATCTATGGGACTGAACTTTGAGCTGCACTGT--------------- 108645 ||||| ||||||||||||||||||||||||| |||| | ||| || Sbjct 6265875 TACGTTATAAGGCCATCTATGGGACTGAACTCTGAGATACACCGTGAGAGGATTGCTACC 6265934 Query 108646 ---GGGCCAGGGAC-TGTGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGG 108701 ||| |||| || ||| | ||| ||||||| | | |||| || |||||||||||| | Sbjct 6265935 CAAGGGGCAGGAACATGTACAAACGTGCCCAGAACATGCTGGGACAGTGTGGGGTGGGAG 6265994 Query 108702 ACGAGGGCTGTGGAATCCATGGCATCCCCCAGGGTCAGAGGGCTGCT 108748 | |||||| |||||||| ||||||| ||| ||||||| |||||||| Sbjct 6265995 AGCAGGGCTCTGGAATCCGTGGCATCTCCCTGGGTCAGGGGGCTGCT 6266041 >seq80 Length=10124391 Score = 95.1 bits (104), Expect = 8e-15 Identities = 563/891 (63%), Gaps = 33/891 (4%) Strand=Plus/Minus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || ||||| |||||| ||| || || || || || || | ||||| ||| | || Sbjct 480245 CCCCTTAGTAAGGAAGAGGCAGAGTTTCCAATAGCATATTCTGTAGTGGTTCATCACAAA 480186 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 ||||||| |||| |||| ||| | ||| | ||| |||||||| | || || | Sbjct 480185 ATTGAAATGCTTGACAGGCTCCTGAGGGCCATTTATATGCCTCAGAATTTCTATTGCATT 480126 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 ||||||||| || || || | || | ||||| | | |||| ||||| Sbjct 480125 CACGTGGATTCAAAATCAGAGGAATCCTTTTTGGCCGCGGTGATTGGCATTGCATCCTGT 480066 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||| |||||||| |||||||| || ||| || || ||||| || ||| | | Sbjct 480065 TTCAGTAATGTCTTTGTGGCCAGTCAGCTGGAGAGCGTTGTGTATGCATCTTGGAGCCGG 480006 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAGT 107985 || || |||||||| ||||| ||| | ||| | || | || | | || ||||||| Sbjct 480005 GTTCAGGCTGACCTCAACTGCATGCAGGACCT-CTACCGAA-TGAACGCAGACTGGAAGT 479948 Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045 |||| | ||| ||||| | || || || || || ||||| || || ||| | Sbjct 479947 ACTTGATAAATCTCTGCGGTATGGATTTTCCTATTAAAACCAACCTGGAAATTGTCAGGA 479888 Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAG---GTACCTTCTGAGTCCa 108102 |||||| ||| | ||| |||| | | || | ||| | || || | | Sbjct 479887 AGCTCAAGTCGTTAATGGGCGAGAATAACCTAGAAACGGAGAGAATGCCATCCAA---TA 479831 Query 108103 aaaaaaaTCGCTGGAAATACCGCTATG-AG--GTGACAGACACACTGTACCCTACCAGCA 108159 ||||| | | |||||| | | |||| || |||| | | || || | || Sbjct 479830 AAAAAGAAAGGTGGAAAAAGCATTATGCAGTCGTGAATGGAAAGTTG------ACAAACA 479777 Query 108160 AGATGAAGGAC------CCTCCCCCTGATAATTTACCCATGTTCACAGGGAATGCCTATT 108213 | || ||| | ||| ||| | | ||| |||| |||| | |||||||| Sbjct 479776 TGGGGACCGACAAAATACATCCTCCTCTTGAAACACCTCTGTTTTCAGGCAGTGCCTATT 479717 Query 108214 TTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGACTGG 108273 |||||| | | | | ||| | |||| | || || ||| |||| | Sbjct 479716 TTGTGGTCAGTAGGAGGTATGTGGAGTATGTGCTCGAGAATGAAAAAATACAAAAGTTTA 479657 Query 108274 TTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGCGTG 108333 | || |||| |||||||| || ||||| ||||| | ||||||||||| ||||| | | Sbjct 479656 TGGAGTGGGCAAAAGACACATACAGCCCGGACGAGTATCTCTGGGCCACTATTCAGAG-G 479598 Query 108334 CTCCGTGGA-TGCCTGGCTCTGT-TCCT--AGCCACCCCAAGTATCACATCTCAGACATG 108389 ||| | | | || || || | |||| ||||| ||||| | || || |||||| Sbjct 479597 ATCCCCGAAGTCCCAGGGTCACTGTCCTTAAGCCA---TAAGTACGATATGTCCGACATG 479541 Query 108390 ACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGCG 108449 || || |||||| | ||||||||||||||| || || || | || ||| || Sbjct 479540 CAAGCAATTGCCAGGTTTGTCAAGTGGCAGTACTTTGAAGGTGACATTTCCAAGGGCGCC 479481 Query 108450 CCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGAC 108509 || || | || ||| || |||| | | || | ||| ||| ||| || || ||| Sbjct 479480 CCCTACCCGCCGTGCAGCGGCGTCCACGTGCGCTCCGTGTGCGTTTTCGGAGCGGGTGAC 479421 Query 108510 CTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCG 108560 || ||||||| || | || ||| | || || |||||||| ||| || Sbjct 479420 TTGAACTGGATGCTGCGCGTGCACCACTTGTTCGCCAACAAGTTCGACACG 479370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348261720130632