Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq83 132 4e-26 >seq83 Length=9572586 Score = 132 bits (146), Expect = 4e-26 Identities = 371/565 (66%), Gaps = 11/565 (2%) Strand=Plus/Minus Query 20213 AAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATG 20272 |||| |||||||| || | || ||| | ||||| ||||| | ||| | || |||| Sbjct 1005935 AAGAAGGGGATTTAGGCCTAGTTTATAGCTTTCAGTGGAGGCTTTTGGTGGCCAAATACA 1005876 Query 20273 TTGACATGAACACAAATT-ATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAAT 20331 || || | ||||| ||| || ||||||||||| ||| | ||||| || ||| | Sbjct 1005875 AAGATGTGGATTTAAATTTATTCAGGTCAAGGAGTAGACCAACTGCAAAAGGTGATTGAC 1005816 Query 20332 TTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGAT 20391 ||| ||||| ||||| | ||||||||||| ||| || | || ||||| ||| ||| Sbjct 1005815 ACAATCAAAACCAACCCTGAAGACAGAAGAATCATTCTACGTGCTTGGAATCGTAA-GAT 1005757 Query 20392 GTGCCTTTAATGGCTT-------TGCCTCCATGTCATATGCTATGCCAATTTTACGTTGC 20444 | ||| | || | |||| | || ||| || ||||| || ||||| Sbjct 1005756 CTTCCTCTCATACCCCACCACCCTGCCCCTGTGCCATGCCCTTTGCCACTTCTACGTGAT 1005697 Query 20445 TAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCC 20504 || |||| | ||| || || |||| || | || | || ||| ||| |||| | Sbjct 1005696 GAACCATGACT-GTCCTG-CAGCTGTACCAGAGGTCAGGAGACGGGGGCCTGAGTGTGTC 1005639 Query 20505 TTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564 ||||| || || || ||||| ||||| || || ||||| ||||| | |||| | || Sbjct 1005638 CTTCAACATCGCCAGCTATGCCCTGCTCACCTACATGATCGCACACATCACAGGCCTGAA 1005579 Query 20565 AACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACC 20624 | ||||||| || ||||| | ||||| || ||||||||||| |||| || || | Sbjct 1005578 GCCAGGTGACTCTGTACACACTTTGGGAGATGCACATATTTACCTGGATCACATTGAGCT 1005519 Query 20625 TTTAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAAC 20684 | ||| | ||| | || || ||| | ||||||| || || | ||| Sbjct 1005518 GCTGAAAATGCAGCTTCAGGGAGAATCAAGGCCTTTCCCAAAGCTCAAAATCCTTGGAAA 1005459 Query 20685 TGTTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCA 20744 ||| | | || | || || || ||||| || ||| | | ||||| || | |||||| Sbjct 1005458 AGTTGAGAAAATCGATGACTTCAAGGCTGAAGACTTTCAGATTGAAGGCTACAGTCCCCA 1005399 Query 20745 TAATTCAATTCCAATGGAAATGTCT 20769 | | ||| |||||||||| || Sbjct 1005398 TCCCACTATTAAAATGGAAATGGCT 1005374 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399175885088260