Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq82 104 2e-17 >seq82 Length=8814989 Score = 104 bits (114), Expect = 2e-17 Identities = 120/162 (74%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 22740 ACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCAT 22799 |||| || | |||||||| || | ||||| || | |||||||| || ||||| | | Sbjct 1281485 ACGTGTCGTAGCCTTTGCCGCAGCGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCTGT 1281426 Query 22800 ATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAG 22859 ||| ||||| |||||||| |||||| | || | | |||||||| || | ||||| Sbjct 1281425 ATTGTGGCTCAAGAAACGAGGACTCATGTCCGGCCTCACATTTTCCAATGAACTTATTAG 1281366 Query 22860 CCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGtt 22901 | | ||||| ||| |||||||||||||||| || || |||| Sbjct 1281365 CAGAGACGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTT 1281324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356226358216204