Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq72 91.5 2e-13 >seq72 Length=17005112 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/205 (71%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 164500 TTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACA 164559 ||||| || |||||| | ||||| || | ||| |||| ||||| ||||| ||||| || Sbjct 16729739 TTAGGTTGCAAACATGTTAAAGGCATCCTGTTATATGGGCCTCCAGGTTGTGGTAAGACT 16729798 Query 164560 TTAATGGCTCGATGCATTGCTCAAGCTTTTAAATC---GCGACCCGTTAAAATTGTTAAT 164616 | |||||||| |||| |||| | || ||| | || || |||| | || ||| Sbjct 16729799 CTCTTGGCTCGACAGATTGG-CAAGATGTTGAATGCAAGAGAGCC--TAAAGTGGTCAAT 16729855 Query 164617 GGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTT 164676 || || ||| | | ||||||||||| || || ||||| ||||| || | || | ||| Sbjct 16729856 GGGCCGGAAATCCTCAACAAATATGTGGGAGAATCAGAGGCTAACATTCGTAAACTCTTT 16729915 Query 164677 CAGGAGGCTGAAGAAGAACAAAAGA 164701 || |||||||| || |||| || Sbjct 16729916 GCTGATGCTGAAGAGGAGCAAAGGA 16729940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595859576068800