Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq114 100 7e-16 seq66 87.8 5e-12 >seq114 Length=7505490 Score = 100 bits (110), Expect = 7e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||| |||| |||| ||||||||| || || |||| |||||||| || || || ||| Sbjct 203480 GCTCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACAGAGACAGGTACCCCGTACATG 203421 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||||||||| || || || ||| |||||||||| |||| || || || | Sbjct 203420 CTCTACAAAGATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTAGGAACGATCAAATGC 203361 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACC 364263 |||||||| || || || || | ||||| ||| Sbjct 203360 AGCAACCTGTGCACAGAAATAGTAGAATATACC 203328 >seq66 Length=17242564 Score = 87.8 bits (96), Expect = 5e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548 |||||| || | || ||||||| || ||||| || ||||||||||| | ||| | Sbjct 10224050 GAACGTGTTGTAGCCTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCG 10223991 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 || || ||||| |||||||| | | | ||||| || || || ||||| ||||| | ||| Sbjct 10223990 ATATTCTGGCTCAAAAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATT 10223931 Query 22609 AGCCGAGATGAGG 22621 ||| |||| |||| Sbjct 10223930 AGCAGAGACGAGG 10223918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303325745704376