Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq20 102 8e-17 seq53 89.7 5e-13 seq62 87.8 2e-12 seq34 86.0 6e-12 >seq20 Length=22150888 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 ||||||| | || ||| || || | || | ||||||||| || || ||||||||||| Sbjct 5019759 AGCCACCCCTCAGACGAAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAG 5019700 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | ||||| || || ||||| |||||||| |||| | | ||||||||| || | Sbjct 5019699 AGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGG 5019640 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| ||||| || || ||| || ||| | | ||| | || || ||| ||| | Sbjct 5019639 GGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCA 5019580 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| || || || ||||| |||||||| Sbjct 5019579 CCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 5019531 >seq53 Length=16102195 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | | || ||| | ||| | || ||||||||||||||||||| || | Sbjct 15465276 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTGGTCAGAC 15465335 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || ||||||||||| || |||| | | |||||||| ||||| Sbjct 15465336 AAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGA 15465395 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||| |||| ||||| ||| || ||| | | || ||||| | || |||| Sbjct 15465396 ATTACTTCCTTGTCCTGGATCTTGGCCTTTATGTTTTCTGTTGTATCCGAGGGTTCGACC 15465455 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || || || |||||||||||||| Sbjct 15465456 TCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 15465502 >seq62 Length=15298998 Score = 87.8 bits (96), Expect = 2e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | | || ||| | ||| | || |||||||| ||||||||||| || | Sbjct 5534027 CCACCACGAAGCCTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAC 5533968 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || || ||||||||||| |||| | | |||||||| ||||| Sbjct 5533967 AACGTACGTCCATCTTCCAGGTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGA 5533908 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||| | | || || | ||| | || |||| Sbjct 5533907 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTTTCTACTGCATCCGAGGGTTCGACC 5533848 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA 131233 |||| || | ||| || || || || || || | |||| |||||| Sbjct 5533847 TCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCAAGAAAGTCTGCA 5533802 >seq34 Length=14701056 Score = 86.0 bits (94), Expect = 6e-12 Identities = 157/229 (69%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 ||||||| | || | | || || | || | |||||||| || | ||||||||||| Sbjct 8730410 AGCCACCCCTCAGATGGAGGACCAGGTGCAGTGTCGACTCTTTCTAGATGTTGTAATCAG 8730351 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | ||| | ||| || ||||| |||||||| |||| | | ||||||||| || | Sbjct 8730350 AAAGAGTGTGGCCGTCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGG 8730291 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| ||||| || || ||| || ||| | | ||| | || || ||||||| | Sbjct 8730290 GGATGCCTTC-TTATCCTGGATCTTGGCCTTCATGTTCTCGATGGTGTCACTGGACTCCA 8730232 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| || || || || || || || || ||||| |||||||| Sbjct 8730231 CCTCCAGGGTGACAGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 8730183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472002958533120