Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq20 172 1e-37 seq84 170 4e-37 seq33 140 6e-28 seq34 134 3e-26 seq62 129 1e-24 seq259 111 3e-19 seq166 104 4e-17 seq265 100 5e-16 seq4 98.7 2e-15 seq22 91.5 3e-13 >seq20 Length=22150888 Score = 172 bits (190), Expect = 1e-37 Identities = 166/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || |||||||| |||||||| ||||| ||||| || | |||||||| Sbjct 5019739 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCC 5019680 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || || || || ||||| || || ||||| || || ||||||||||| || || Sbjct 5019679 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGG 5019620 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| ||| |||||||||||| | || || |||| ||||||||| || Sbjct 5019619 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 5019560 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || |||||||| ||||| ||||||||| || Sbjct 5019559 CCGGTCAGGGTCTTCACGAAGATCTGCATTTTG 5019527 >seq84 Length=11797838 Score = 170 bits (188), Expect = 4e-37 Identities = 169/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||| | |||| ||| || ||||||||||| |||||||| || || || || || | | Sbjct 5419755 AGGCGAAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGC 5419696 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | ||| |||||||| || || || || || ||||| || || ||||| || Sbjct 5419695 CCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCT 5419636 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 || ||||| ||||| |||||||| |||||||||||| | || || |||| |||| Sbjct 5419635 TTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 5419576 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||| || || || | |||||| ||||| ||||||||| Sbjct 5419575 ATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCATT 5419537 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | | ||||| |||| ||| || ||||| ||||| |||||||| || || || Sbjct 5420822 CCTCCCCTTAAGCGCAGGACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGAC 5420763 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||||||| | ||| |||||||| || || | || || ||||| || || Sbjct 5420762 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGG 5420703 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| |||||||| |||||||||||| | || || Sbjct 5420702 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 5420643 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| || || || | |||||| ||||| |||||||| Sbjct 5420642 TCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 5420596 Score = 138 bits (152), Expect = 2e-27 Identities = 136/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || |||||||| |||||||| ||||| || || || | |||||||| Sbjct 5420576 ACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 5420517 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| |||||||| || || || || || ||||| || || ||||||||||| || || Sbjct 5420516 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGG 5420457 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||||| ||||| ||| |||||||||||| | || || |||| ||||||||| Sbjct 5420456 ATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 5420401 >seq33 Length=16598743 Score = 140 bits (154), Expect = 6e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | ||| || | || || |||| ||| ||||| ||||| || || || Sbjct 8627182 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCAGAC 8627123 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||| ||| ||||| || || || || |||||||| ||||| || ||| Sbjct 8627122 AGAGTACGTCCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGA 8627063 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || ||||| ||||| || || || || || | | || || Sbjct 8627062 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACC 8627003 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || ||||| |||||||| |||||||||||||| Sbjct 8627002 TCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCAT 8626956 >seq34 Length=14701056 Score = 134 bits (148), Expect = 3e-26 Identities = 156/209 (75%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || |||||||| | |||||| ||||| || || || || ||||| Sbjct 8730390 ACCAGGTGCAGTGTCGACTCTTTCTAGATGTTGTAATCAGAAAGAGTGTGGCCGTCTTCC 8730331 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || || || || ||||| || || ||||| || || |||||||| || || || Sbjct 8730330 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTC-TTATCCTGG 8730272 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| | | |||||||||||| || || || |||| ||||| || || Sbjct 8730271 ATCTTGGCCTTCATGTTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGACAGTCTTG 8730212 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||| ||||| |||||||| Sbjct 8730211 CCAGTCAGGGTCTTCACGAAGATCTGCAT 8730183 >seq62 Length=15298998 Score = 129 bits (142), Expect = 1e-24 Identities = 164/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | ||| || | || || |||||||| || || ||||| || || || Sbjct 5534027 CCACCACGAAGCCTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAC 5533968 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | ||||| || || || || |||||||| ||||| || ||| Sbjct 5533967 AACGTACGTCCATCTTCCAGGTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGA 5533908 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || ||||| ||||| ||| || | | || | | ||| || Sbjct 5533907 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTTTCTACTGCATCCGAGGGTTCGACC 5533848 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460 || | |||||||| || ||||| |||||||| | ||| |||||| Sbjct 5533847 TCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCAAGAAAGTCTGCA 5533802 >seq259 Length=1197011 Score = 111 bits (122), Expect = 3e-19 Identities = 161/226 (71%), Gaps = 1/226 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| | ||| || | || || |||||| | ||||| ||||| | || | Sbjct 605931 CCACCACGAAGTCTCAACACAATATGAAGAGTGGACCCCTTTTGAATGTTGTGGTCAAAC 605872 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | ||||| || || || || ||||| || ||||| || | | Sbjct 605871 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGGGAA 605812 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||||||||| || ||||| ||||| || || | || || | | ||| || Sbjct 605811 ATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACC 605752 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCA 68460 || | ||||||| | |||| || |||||||| ||||| ||||||| Sbjct 605751 TCGAGAGTGATGG-TCTTCCTGTCAGGGTCTTCACGAAAATCTGCA 605707 >seq166 Length=5848183 Score = 104 bits (114), Expect = 4e-17 Identities = 150/208 (72%), Gaps = 3/208 (1%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||||||||| ||||| ||||| ||||| ||||| || ||||| || | ||||| || Sbjct 1459263 ACCAAGTGTAGGGTGGATTCTTTCTGGATATTATAGTCTGAGAGAGTACGGCCATCCTC- 1459205 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || | || || || || || ||||||| || | ||| | || |||||| Sbjct 1459204 AGCTGTTTGTCTGCAAAAATCAGACTCTGTTGGTGAGGCAGGATGTCCTCAGTGTCTTTG 1459145 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA-TTCTACTTCCAAGGTGATGGTTTT 68431 || || || ||||| ||| ||||| | |||| || || || | |||||||| || Sbjct 1459144 ATTTTGGCTTTGACATTCTCAGTGGTGAC-ACTGAGTTTGACCTCAAGAGTGATGGTCTT 1459086 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGC 68459 ||||| |||||||| || || || ||| Sbjct 1459085 GCCCGTCAGGGTCTTCACAAAGATTTGC 1459058 >seq265 Length=2252016 Score = 100 bits (110), Expect = 5e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | ||||| || || || || |||||||| ||||| || ||||| |||||| Sbjct 744453 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 744394 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 ||||| || ||||| |||| || || | || || | | ||| || || | ||| Sbjct 744393 TTGTCCTGGATCTTGACCTTTACATTTTCTGTCGTATCCGAGGGTTCGACCTCGAGAGTG 744334 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||| || ||||| |||||||| || || |||||||| Sbjct 744333 ACGGTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCAT 744296 >seq4 Length=32345528 Score = 98.7 bits (108), Expect = 2e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || |||||||| |||||| | ||||| || | || | |||||||| Sbjct 25269427 ACCAGGTGCAGGGTCGACTCTTTCTGGATGCTGTAATCAGAAGGAGTGCGGCCATCTTCC 25269368 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || || || || ||||| || || || || || || |||||||| || || | Sbjct 25269367 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGATCAGGGGGGATGCCTTCTTTATCCTCG 25269308 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTC 68401 ||||| ||||| | | |||||||||||| Sbjct 25269307 ATCTTGGCCTTCATGTTCTCGATGGTGTC 25269279 >seq22 Length=18397422 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||||| ||| | ||||||||| |||||||| | || |||||| || ||| |||| Sbjct 1474044 ACCAAGTATAGGGGGGACTCTTTCTGGATGTTGTTGTCTGAGAGTT--CTACCAGCTTCC 1474101 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 |||| | || || || || || ||||| || | ||||| ||||||||||| Sbjct 1474102 CACTGTTGGCCCATAAAAATCAGATGCTGCTGGTCAGGCAGGATGCCCTCCTTGTCTTGG 1474161 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || |||||| || |||| ||| | || || || | |||| |||| || Sbjct 1474162 ATTTTGGCTTTGACGTTCTTTATGGCGTCACTGGGCTCCACCTCAAGGGTGGTGGTCTTG 1474221 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || ||||| || | |||||||| Sbjct 1474222 CCTGTCAGAGTCTTCACACAGATCTGCAT 1474250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921603184172960