Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq53 105 6e-18 seq265 100 2e-16 seq33 98.7 8e-16 seq259 95.1 1e-14 seq20 95.1 1e-14 seq62 89.7 4e-13 seq61 84.2 2e-11 >seq53 Length=16102195 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||||||| || | ||| | || || || ||||||||||||| || Sbjct 15465275 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTGGTCAGA 15465334 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||||| |||||| || || || ||||| |||| || | || ||||| ||||| Sbjct 15465335 CAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGG 15465394 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| |||| ||||| ||||| |||| | ||| || || | || |||||| Sbjct 15465395 AATTACTTCCTTGTCCTGGATCTTGGCCTTTATGTTTTCTGTTGTATCCGAGGGTTCGAC 15465454 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || ||||| || || || ||||||||||| Sbjct 15465455 CTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 15465502 >seq265 Length=2252016 Score = 100 bits (110), Expect = 2e-16 Identities = 160/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| | |||||| || | ||| | || || || | |||| |||||| || Sbjct 744519 ACCACCACGGAATCTCAACACAAGATGAAGAGTGGACTCCTCTTGAGTGTTGTGGTC--- 744463 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||||| |||||| ||||| || ||||| |||| || | || ||||| ||||| Sbjct 744462 CA-AGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGG 744404 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| ||||| ||||| |||| | ||| || || | || |||||| Sbjct 744403 AATTCCTTCCTTGTCCTGGATCTTGACCTTTACATTTTCTGTCGTATCCGAGGGTTCGAC 744344 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || || || || || ||||| || || |||||||||||||| Sbjct 744343 CTCGAGAGTGACGGTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCAT 744296 >seq33 Length=16598743 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| |||||||| || | ||| | || | || |||||||||||||| || | Sbjct 8627182 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCAGAC 8627123 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | |||||| || ||| |||| || ||||| |||| || | || ||||| |||||| Sbjct 8627122 AGAGTACGTCCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGA 8627063 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| ||||| |||| | ||| | || || | || || ||| Sbjct 8627062 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACC 8627003 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || ||||| || || || || |||||||| Sbjct 8627002 TCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCAT 8626956 >seq259 Length=1197011 Score = 95.1 bits (104), Expect = 1e-14 Identities = 158/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||||||| || | ||| | || || | ||||||||||||| || Sbjct 605932 ACCACCACGAAGTCTCAACACAATATGAAGAGTGGACCCCTTTTGAATGTTGTGGTCAAA 605873 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||||| |||||| ||||| || ||||| |||| || | ||| ||||| || | Sbjct 605872 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGGGA 605813 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| ||||| ||||| |||| | ||| || || | || ||| || Sbjct 605812 AATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAAC 605753 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 114381 || | || | || || || ||||| || || || |||||||||| Sbjct 605752 CTCGAGAGTGATGGTCTT-CCTGTCAGGGTCTTCACGAAAATCTGCA 605707 >seq20 Length=22150888 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || ||||||||||| | ||| || |||||| || ||||| || Sbjct 5019727 GTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCT 5019668 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| | ||| ||||| || || |||||||| || || ||||| || Sbjct 5019667 GCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC 5019608 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||| ||| || || |||| ||| | || ||||||||||| || Sbjct 5019607 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 5019548 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 5019547 TTCACGAAGATCTGCAT 5019531 >seq62 Length=15298998 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || ||||| || | ||| | || || || || ||||||||||| || Sbjct 5534028 ACCACCACGAAGCCTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGA 5533969 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||||| |||||| || || || || || |||| || | || ||||| ||||| Sbjct 5533968 CAACGTACGTCCATCTTCCAGGTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGG 5533909 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| ||||| ||||| |||| | ||| || | || | || |||||| Sbjct 5533908 AATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTTTCTACTGCATCCGAGGGTTCGAC 5533849 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA 114381 || | || | || || || ||||| || || | ||| |||||| Sbjct 5533848 CTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCAAGAAAGTCTGCA 5533802 >seq61 Length=12256116 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 114154 TACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGC 114213 |||| |||| |||||||| | | ||| | ||||| || |||||||||||||| || Sbjct 4027220 TACCAGCACGAAGTCTCAACAGAAGATGAAAAGTAGACTCCTTTTGAATGTTGTAGTCAG 4027279 Query 114214 TCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAG 114273 || |||||| |||||| ||||| || ||||| || | || | | ||||| | || Sbjct 4027280 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGGTTAGTCTTCGCTGGTCAGAAG 4027339 Query 114274 GAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGA 114333 |||| |||| || || ||||| |||| | ||| | || || | || ||||| Sbjct 4027340 GAATTACTTCCTTATCTTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCGA 4027399 Query 114334 CGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || | || || || || ||| | | || | |||||||||||| Sbjct 4027400 CCTCGAGAGTGGTGGTCTTCCCTGTCCGGATCTTCATAAAAATCTGCAT 4027448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420125859192816