Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq33 87.8 1e-12 seq265 86.0 4e-12 >seq33 Length=16598743 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 |||||| || | ||| || || | |||||| || | || ||||| |||||||| || Sbjct 8627183 GCCACCACGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCAGA 8627124 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 ||| | | | | ||| ||| |||||||| | |||| | || ||||| || Sbjct 8627123 CAGAGTACGTCCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGG 8627064 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 ||||||||||||||| || ||| |||||| ||||||| ||||| || || Sbjct 8627063 AATTCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGAC 8627004 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | || ||||| || || ||||| || || || || || |||||||| Sbjct 8627003 CTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCATATT 8626953 >seq265 Length=2252016 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| || ||||| || || | |||||| || || || | ||| |||||| || | Sbjct 744518 CCACCACGGAATCTCAACACAAGATGAAGAGTGGACTCCTCTTGAGTGTTGTGGTCCAAG 744459 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | ||||| | ||| |||||||| | |||| | || ||||| ||| Sbjct 744458 TACATCCA----TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGA 744403 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||||||||| || ||| |||||| ||||| | ||||| ||| || Sbjct 744402 ATTCCTTCCTTGTCCTGGATCTTGACCTTTACATTTTCTGTCGTATCCGAGGGTTCGACC 744343 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || | || | ||| || || ||||| || || |||||||| |||||||| Sbjct 744342 TCGAGAGTGACGGTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCATATT 744293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357384734667380