Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq114 93.3 7e-14 >seq114 Length=7505490 Score = 93.3 bits (102), Expect = 7e-14 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 203917 CCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTT 203976 ||| ||||| | |||||| || ||||||| ||| || || || || || ||||| Sbjct 193144 CCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGTATGTT 193203 Query 203977 CAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTT 204036 || |||||||||||| || ||||||| | | || || ||||| |||| ||||| || Sbjct 193204 CAAAGACTGGCTTTGATCAATGAAAGCTCCTCTCTCAGCTGCCATCTTGAGTATGGTTTT 193263 Query 204037 CTGCGAAATCTCCCACACCGTCTT 204060 ||| || || |||||||| ||||| Sbjct 193264 CTGAGAGATTTCCCACACAGTCTT 193287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795138621014080