Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq24 86.0 7e-12 >seq24 Length=21601121 Score = 86.0 bits (94), Expect = 7e-12 Identities = 156/228 (68%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 46366 GCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGA 46425 ||| || |||| ||| | ||||| |||| ||| ||| || ||||| ||||| || || Sbjct 9816207 GCCACCCCTTAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGA 9816148 Query 46426 TAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGG 46485 | |||||| | || || ||||| ||||| || || || | | ||||||||||| || Sbjct 9816147 AATAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAACATGAGCCTCTGCTGGTCGG-GGG 9816089 Query 46486 CACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | || || || ||| |||||| ||| | || | ||||| || | ||||| Sbjct 9816088 GATGCCTTCTTTATCCTGGATCTTGGCCTTCACATTCTTGATGGTGTCACTGGGCTCCAC 9816029 Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || ||| ||||||||||| || || ||||||||| ||| Sbjct 9816028 CTTCA-------GGTCTTGCCCGTCAGGGTCTTCCCAAAGATTTACAT 9815988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565226614779360