Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq20 132 5e-26 seq84 122 9e-23 seq34 96.9 3e-15 seq8 95.1 1e-14 >seq20 Length=22150888 Score = 132 bits (146), Expect = 5e-26 Identities = 170/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||||| || || || || ||||| ||||||||| | || || ||| || Sbjct 5019528 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 5019587 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | |||| | || | || |||| || || || || || ||| | || Sbjct 5019588 AGTGACACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCAGA 5019646 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||| ||||||| | || |||||||||||||| || | ||||| ||| || || Sbjct 5019647 CCAGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTA 5019706 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||| || || |||| ||||| |||| || ||| |||| || ||| Sbjct 5019707 CAACATCCAGAAAGAGTCGACCCTGCACCTGGTCCTTCGTCTGAGGGGTGGC 5019758 >seq84 Length=11797838 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || ||||| ||||||||| | || || ||| ||| Sbjct 5420596 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACCTTGGAGGTGGAGCCCAGT 5420655 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 5420656 GACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 5420715 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| || | || | || || ||||||||||| || | ||||||||| ||||||||| Sbjct 5420716 CAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAAC 5420775 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| || ||| | || ||||| |||| ||||| || || || || Sbjct 5420776 ATCCAGAAAGAATCCACTCTGCACCTGGTCCTGCGCTTAAGGGGAGG 5420822 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||||| || || | || || || ||||||||| | || || ||| ||| Sbjct 5419537 AATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 5419596 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | || | || |||| || |||||||| || ||| | |||| Sbjct 5419597 TGACACCATCGAGAACG-TCAAGGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCAGACC 5419655 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| |||| || | || || ||||||||||| || | ||||||||| ||||||| Sbjct 5419656 AGCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACA 5419715 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| || || | || ||||| |||| || || | ||||| || Sbjct 5419716 ACATCCAGAAAGAGTCCACTCTGCACCTGGTCCTTCGCCTCAGAGGTGG 5419764 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 38277 ACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCT 38335 ||||||||| | || || ||| ||| |||| | | | |||| | || | || |||| Sbjct 5420401 ACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAACG-TGAAGGCCAAGATCCA 5420459 Query 38336 CGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGA 38395 || || || || || ||| | ||||| ||| |||| || | || || ||||||||||| Sbjct 5420460 GGATAAGGAAGGCATCCCCCCAGACCAGCAGAGGCTGATCTTTGCCGGGAAACAGCTGGA 5420519 Query 38396 CGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCT 38455 || | ||||| || || ||||||||||| || || |||| ||||| |||| || Sbjct 5420520 AGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCGACCCTGCACCTGGTCCT 5420579 Query 38456 GCGTTTGAGAGGCGG 38470 ||| |||| || || Sbjct 5420580 CCGTCTGAGGGGTGG 5420594 >seq34 Length=14701056 Score = 96.9 bits (106), Expect = 3e-15 Identities = 159/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || ||||| | || || ||| ||| Sbjct 8730183 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACTGTCACCCTGGAGGTGGAGTCCAGT 8730242 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| || || || || || ||| | ||||| Sbjct 8730243 GACACCATCGAGAACATGAAGGCCAAGATCCAGGATAA-GAAGGCATCCCCCCTGACCAG 8730301 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||||| | || |||||||||||||| |||| | ||| || || |||||| Sbjct 8730302 CAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGACGGCCACACTCTTTCTGATTACAAC 8730361 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||| | || || |||| ||||| |||| || | | |||| || ||| Sbjct 8730362 ATCTAGAAAGAGTCGACACTGCACCTGGTCCTCCATCTGAGGGGTGGC 8730409 >seq8 Length=29698465 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/228 (70%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || |||| ||||||||| | || || ||| ||| | Sbjct 12480362 ATGCAGATCTTCGTGAAGACCCTGACCTGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 12480303 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || || || || | | | | || |||| || ||||| || || || || ||| | Sbjct 12480302 GA--GCCTGAGAATG-TGCAGGCCAAGATCCAGGATAAAGAAGGCAT-CCTGCTGACAAG 12480247 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||| ||||| | | || ||||||||| |||| || | ||||| || || |||||| Sbjct 12480246 CAGAGGCTCCTCTTTGCAGGCAAACAGATGGAAGATGGCCGCACTCTTTCTGATTACAAC 12480187 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || || |||| ||||| |||| || || |||| || ||| Sbjct 12480186 ATCCAGAAAGAGTCGACCCTGCACGTGGTCCTCTGTCTGAGGGGTGGC 12480139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500162371397120