Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq71 188 3e-42 seq102 167 9e-36 seq15 149 2e-30 seq29 109 2e-18 seq23 98.7 4e-15 seq53 96.9 1e-14 seq157 93.3 2e-13 seq33 91.5 6e-13 seq10 87.8 7e-12 >seq71 Length=10149521 Score = 188 bits (208), Expect = 3e-42 Identities = 465/698 (67%), Gaps = 18/698 (3%) Strand=Plus/Minus Query 450914 GCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAAT 450973 ||| |||| ||||||||||| |||||| ||| ||||| ||||| | ||| ||||||| Sbjct 7540672 GCAGTTGGCATTGATCTTGGCACCACCAATTCTTGTGTGGGTGTCTTCCAGCATGGAAAG 7540613 Query 450974 GTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTACG 451033 || ||||| || || ||||| || || |||| ||| ||| | || | ||||| Sbjct 7540612 GTGGAAATAATTGCCAATGATCAGGGGAACCGAATTACACCTAGCTATGTCACCTTTACT 7540553 Query 451034 GATTCAGAAAGACTTTTAGGGCAAGCTGCTA--AATCAATGGTAAATTCAAATGCCAAAA 451091 ||| | ||| || | | || | | ||| | |||||| ||| ||| ||| | Sbjct 7540552 GATACCGAACGATTGATCGGTGATGTTGCAAACAATCAAGTTGCAAT--GAATCCCACCA 7540495 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151 |||| || | |||||| |||| | | ||| || | | |||||||| | ||| || Sbjct 7540494 ACACGGTGTTTGATGCCAAACCCCTCACTGGACGAAGATTTGATGATGCTGTTGTCCAGT 7540435 Query 451152 AAGAGA--AAAAATT--CTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATT 451207 || | || ||| | |||| ||| || || ||| | ||| | ||| | || Sbjct 7540434 CTGATATGAAGCATTGGCCTTTC--ATG--GTGGTGAATGATGCAGGCAGGCCTAAGGTT 7540379 Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 |||| | | || || || || || ||| |||| ||| || || | ||||| |||||| Sbjct 7540378 CAAGAAGAATACAAGGGAGAGACAAAAGGTTTTTATCCAGAGGAGGTGTCATCCATGGTT 7540319 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 | || || ||||| |||| ||||||| || || | | ||||| |||| || Sbjct 7540318 TTGACAAAGATGAAGGAAATAGCAGAAGCCTACCTTAGGAAGACTGTTACCAATGCTGTT 7540259 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 | || || |||||||| || |||||| | || || || || || |||||||| ||| | Sbjct 7540258 GTCACAGTACCCGCTTACTTTAATGATTCTCAGCGTCAGGCTACCAAAGATGCTGGAACT 7540199 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 |||||||| | ||||| ||| || || || ||||| || || |||||| | || ||| Sbjct 7540198 ATTGCTGGGCTCAATGTACTTAGA---ATCAACGAACCGACTGCTGCTGCTATTGCCTAT 7540142 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 || ||| || ||| | || ||||| |||| | | | |||||||| ||||| Sbjct 7540141 GGCTTAGACAA---AAATGTTGGAGCAGAAAGAAATGTGCTGATCTTTGATTTAGGTGGT 7540085 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACC 451567 || ||| |||| || | || | ||||| |||| | ||||| || || | || Sbjct 7540084 GGCACTTTTGATGTGTCAATCCTCACTATTGAGAATGGAATCTTTGAGGTCAAATCTACA 7540025 Query 451568 AATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| ||||| || || | || ||||| |||| || Sbjct 7540024 GCTGGAGATACCCACTTACGTGGAGAAGACTTTGACAA 7539987 >seq102 Length=7051813 Score = 167 bits (184), Expect = 9e-36 Identities = 361/529 (68%), Gaps = 12/529 (2%) Strand=Plus/Plus Query 451967 GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTT 452026 || ||| |||| ||||||| | || |||||||| |||||||| |||||||| || || Sbjct 3903741 GGGAAAGAACTGAATAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTC 3903800 Query 452027 CAAGCAGCTATTCTAACAGGTT-CAGATGATGAAAAATTAGGAGATATTCTGTTAGTAGA 452085 || ||||| |||||| | || ||||| |||||| | ||| | ||| | | || Sbjct 3903801 CAGGCAGCCATTCTATCTGGAGACAGATC-TGAAAATGTTCAAGACTTGCTGCTGTTGGA 3903859 Query 452086 TGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAA 452145 ||| || ||||| || |||||| || |||| |||||||| | |||||| | || || Sbjct 3903860 TGTCACTCCTCTTTCCCTTGGAATTCAAACTACTGGTGGAGTCATGACTGTCCTCATCAA 3903919 Query 452146 ACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGT--GATAAC 452203 || | || | ||||| || ||| || || | | || | | | || ||| Sbjct 3903920 GCGCAGCACCACCATTCCCACCAAGCAGACACAGACTGTCACAAC--CTACTTGGACAAC 3903977 Query 452204 CAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAAT 452263 || || |||||| ||||| || | |||||| || | ||| ||||| ||||| || Sbjct 3903978 CAGCCTGGTGTACTCATTCAGGTTTATGAAGGTGAGCATGCCATGACCAAGGATAACAAC 3904037 Query 452264 AAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATT 452323 | || ||| || || ||| |||||| ||| | || |||||||||| Sbjct 3904038 CTGCCTGGCACGTTTGAACTCACAGGCATACCTCCT--GCCCCGTGGTGTTCCTCAAATT 3904095 Query 452324 GAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGA-AAAATC 452382 ||| | || | |||| ||||||| ||||| || || | ||| ||| || | || | | Sbjct 3904096 GAACTCACTTTTGATATTGATGCCAATGGCATCCTCAGTGTCTCTGCTGTGCATAAGAGC 3904155 Query 452383 ATCTGGAAAATCAGAA-AAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAG 452441 | | |||||| |||| || ||||| || ||||||||||| |||||| || |||| Sbjct 3904156 A-CAGGAAAA-GAGAACAAGATTACCATCACTAATGATAAGGGCCGTTTGAGCAAGGAAG 3904213 Query 452442 ATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490 | |||||| | ||||| | |||||||| || | ||| | ||| ||||| Sbjct 3904214 ACATTGAACACATGGTTCAGGAAGCAGAGAAGTACAAAGCTGAAGATGA 3904262 >seq15 Length=25990689 Score = 149 bits (164), Expect = 2e-30 Identities = 226/323 (70%), Gaps = 9/323 (3%) Strand=Plus/Minus Query 451274 AAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACT 451333 || ||| |||| || |||||| | || | || | ||| | ||||| || || ||| Sbjct 16099272 AAGATGGAAGAGACTGCAGAAAATTACTTGGGGCATACAGCAAAAGATGCTGTGATCACT 16099213 Query 451334 GTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCT 451393 || || | ||||||| ||| | || | || || ||||| ||||| || || || || Sbjct 16099212 GTCCCAGTGTATTTCAGTGACTCTCAGAGACAGGCCACTAAGGATGCTGGCCAGATATCT 16099153 Query 451394 GGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTA 451453 || ||||||| ||||| | ||||||||||| |||||||||| ||| || || || ||| Sbjct 16099152 GGACTAAATGTGCTTCGGGTAATTAATGAACCCACAGCAGCTGTTCTTGCCTACGGTCTA 16099093 Query 451454 GGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACT 451513 | |||| ||||||| |||| ||| | |||| |||||| |||| |||||| Sbjct 16099092 GACAAAT---------CAGAAGACAAAATCATTGTCGTATATGATTTAGGTGATGGAACT 16099042 Query 451514 CATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGT 451573 ||||| ||| | || |||| | | || |||||||| || || | |||||||| Sbjct 16099041 TTTGATATTTCCATGCTGGAAATTCAGAAAGGAGTATTTGAGGTGAAATCCACCAATGGA 16098982 Query 451574 GATACTCATCTAGGAGGTGAAGA 451596 || || | |||| |||||||| Sbjct 16098981 GACACGTTTTTAGGTGGTGAAGA 16098959 >seq29 Length=21002292 Score = 109 bits (120), Expect = 2e-18 Identities = 92/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 |||||| ||||||| ||||||| || || |||||||||||||| ||||| || ||||| Sbjct 6612453 GTTACTCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACC 6612512 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 |||||||| ||| ||||||||| || |||||| | |||| || ||||| || Sbjct 6612513 AAAGATGCTGGAACTATTGCTGGGTTGAATGTTATGAGAATCATCAATGAGCC 6612565 >seq23 Length=20571610 Score = 98.7 bits (108), Expect = 4e-15 Identities = 170/245 (69%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 96049 TGCAATTTGTGGCACTAGGGGATCGTCAGGATTTGGGTCAGCCAATAAACTGCATAA--G 96106 |||||| | |||||||||||| || || || ||||| ||| || | || | || | Sbjct 20498577 TGCAATCTCTGGCACTAGGGGGTCATCTGGGTTTGGATCA--CATAGCAGTGAACAAATG 20498634 Query 96107 GATAAAAGTACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAA 96166 |||||||| |||||| ||| |||| || || ||| | | ||| |||||| | | Sbjct 20498635 GATAAAAGAACTTTAGAAATAGTTAAAGCAGGAGACCACTGTGATCTTAGAATATCGAGA 20498694 Query 96167 CAAATTGCACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTA 96226 ||||| || || | ||||||||||||||||||| ||| ||||| || ||| Sbjct 20498695 CAAATGCTGCCATTACTGTTAATATTTGGATGATAAATTCTTGTTGTAAATGCAACCTTA 20498754 Query 96227 GGAGGCTTATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCA 96286 || || || | || |||||| ||||||| |||| || |||||| ||||| | | Sbjct 20498755 GGTGGTTTGAAGGGGTAGTCTGTAGGAAAATGAATTGTCAAAAAGAATACACCACCTTGA 20498814 Query 96287 TAGGG 96291 || || Sbjct 20498815 TATGG 20498819 >seq53 Length=16102195 Score = 96.9 bits (106), Expect = 1e-14 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || ||||| || || || || ||||| || || ||| | || Sbjct 15465502 ATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCG 15465443 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| | ||| || || || || || || ||||||| |||||||||||| || Sbjct 15465442 GATACAACAGAAAACATAAAGGCCAAGATCCAGGACAAGGAAGTAATTCCTCCTGACCAG 15465383 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || || | || || || || ||||||||| | |||||| | || | || Sbjct 15465382 CAAAGACTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCTGACCACAAC 15465323 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || ||||| | || || ||||| Sbjct 15465322 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 15465285 >seq157 Length=5591009 Score = 93.3 bits (102), Expect = 2e-13 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 451367 GCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCT 451426 || ||||| ||||| || || || |||| |||||||| ||||| | ||||||||||| Sbjct 456396 GCCACTAAGGATGCTGGCCAGATATCTGGATTAAATGTGCTTCGGGTAATTAATGAACCC 456455 Query 451427 ACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGA 451467 ||||| |||||||| || ||||| |||| |||||| |||| Sbjct 456456 ACAGCGGCTGCTCTGGCCTATGGTCTAGACAAATCAGAAGA 456496 >seq33 Length=16598743 Score = 91.5 bits (100), Expect = 6e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||| || || || || ||||| || || || | || Sbjct 8626956 ATGCAGATATTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCAAACCCTCG 8627015 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || ||| | | || || || || || |||||||||||||||||||| || Sbjct 8627016 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAC 8627075 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || || | || || |||| ||| ||||| | ||| || | || || || Sbjct 8627076 CAAAGACTGATCTTTGCTGGCAAGCAACGGGAAAATGGACGTACTCTGTCTGACTACAAC 8627135 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | || ||||| | || || ||||| Sbjct 8627136 ATTCAAAAGGAGCCCACTCTTCATCTTGTGTTGAGACT 8627173 >seq10 Length=27321270 Score = 87.8 bits (96), Expect = 7e-12 Identities = 132/186 (71%), Gaps = 5/186 (3%) Strand=Plus/Minus Query 391083 ACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAA 391142 || || |||||||| |||||| | || |||| | ||| | | || || || || Sbjct 23648342 ACCATCACTCTTGAAGTTGAACCCTCAGATACAACAGAAAATGTAAAGGCCAAGATCCAG 23648283 Query 391143 GATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAA 391202 ||||||||||||||||||||||| || ||| | | || || | || || ||| | ||| Sbjct 23648282 GATAAGGAAGGAATTCCTCCTGACCAGCAAAGACTGATCTTTGCTGGCAAGCAAGTGGAA 23648223 Query 391203 GATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCA-CTTAGTATT 391261 |||||| | ||||| || || || ||| | ||||| | || ||||| |||| | || Sbjct 23648222 GATGGACGTACTTT----GACTACAACATTCAAAAGGAGTCCACTCTTCATCTTAATGTT 23648167 Query 391262 AAGACT 391267 ||||| Sbjct 23648166 GAGACT 23648161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975676176428144