Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq933 93.3 5e-14 seq56 93.3 5e-14 seq20 93.3 5e-14 seq1 93.3 5e-14 seq4 91.5 2e-13 >seq933 Length=18306 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 9931 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 9989 >seq56 Length=13463776 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 21016 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 20958 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||| ||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 31654 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 31712 Score = 89.7 bits (98), Expect = 6e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||| |||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 208128 TAGCTCAGTTGGCTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 208070 Score = 84.2 bits (92), Expect = 3e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 |||||||||||| |||||||| ||||| |||||||||||||| ||||||||| |||||| Sbjct 44991 TAGCTCAGTTGGCTAGAGCGTAGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 45049 >seq20 Length=22150888 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 10828183 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 10828241 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 10852644 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 10852586 >seq1 Length=41399143 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 38486377 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 38486435 >seq4 Length=32345528 Score = 91.5 bits (100), Expect = 2e-13 Identities = 188/276 (68%), Gaps = 8/276 (3%) Strand=Plus/Minus Query 158462 CTCTACCCCCAGGATGTTATGGGCGTGTGGCACCTCGTTCGGGTTTGGCTGTGAAGCACT 158521 |||| || | || || |||||| | || || || ||||| || ||||||| || |||| Sbjct 14664677 CTCTTCCTTCTGGGTGCTATGGGAGAGTAGCTCCACGTTCTGGCTTGGCTGCAAAACACT 14664618 Query 158522 GTATCAACGTTGGTGCGGGGGTCATCGATCCTGATTATACTGGAGAAGTCAAAGTCGTTC 158581 || | || || || || ||||| ||| ||||||| ||| | || || || | Sbjct 14664617 TCATAGATGTGGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAATGTTGTTGTTGTAC 14664558 Query 158582 TCTTCAATCATGG---AGACAAGGACTTTGAGGTTAAGAAGGGTGATCGCATCGCACAGC 158638 | || ||| ||| ||| ||| || || || || ||||||||||| || ||||||| Sbjct 14664557 TGTTTAATTTTGGCAAAGAAAAG---TTCGAAGTCAAAAAGGGTGATCGAATTGCACAGC 14664501 Query 158639 TTGTTCTAGAAC-GTTGTGAGACGCCACCCATTGAGGAAATTAACATCGTCGAAGATACG 158697 | || |||| | | | || ||| || |||||| || | | | || || || Sbjct 14664500 TCATTTGTGAACGGATATTTTAC-CCAGAAATAGAGGAAGTTCAAGTTTTAGATGACACT 14664442 Query 158698 GAGAGGGGTTCGGGTGGATTTGGTTCTACTGGCAAT 158733 || |||||||| || || |||||||| ||||| ||| Sbjct 14664441 GAAAGGGGTTCAGGAGGTTTTGGTTCCACTGGAAAT 14664406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588963719850400