Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq84 147 5e-30 seq53 141 2e-28 seq62 129 1e-24 seq265 123 6e-23 seq259 113 1e-19 seq10 111 3e-19 seq24 98.7 2e-15 seq4 98.7 2e-15 seq8 84.2 5e-11 >seq84 Length=11797838 Score = 147 bits (162), Expect = 5e-30 Identities = 169/226 (75%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 |||||| | | || ||||| |||||||||||||| || || ||||| || | || || Sbjct 5419759 TCTGAGGCGAAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGT 5419700 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 | ||||||||| ||||| || || || ||||| || | || |||||||| || ||||| Sbjct 5419699 GCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCC 5419640 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTC 195095 ||||| ||||| || || |||||||||||| |||||||| ||| ||||| || Sbjct 5419639 CTCTTTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 5419583 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| | ||||| || ||||| || || ||||| | |||||| Sbjct 5419582 CAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCATT 5419537 >seq53 Length=16102195 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| ||||| |||||||||||||| |||||||| |||| || | | ||| | Sbjct 15465285 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTGGTCAGACAAAGTACGT 15465344 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| |||||||| || || ||||| |||| ||| ||||| |||||||| |||| Sbjct 15465345 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTACTTCC 15465404 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || || || ||| | ||| || | || ||||| ||| || || || || Sbjct 15465405 TTGTCCTGGATCTTGGCCTTTATGTTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGTG 15465464 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| || |||| || || ||||| | ||||| Sbjct 15465465 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 15465502 >seq62 Length=15298998 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 || ||||| ||||| |||||||||||||| || ||||| ||||| || | | || | Sbjct 5534018 AGCCTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAACGTACGT 5533959 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| ||||| ||||| |||| ||| ||||| |||||||| ||||| Sbjct 5533958 CCATCTTCCAGGTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 5533899 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || || || ||| ||||| || | | ||||| ||| || || || || Sbjct 5533898 TTGTCCTGGATCTTGGCCTTTACGTTTTCTACTGCATCCGAGGGTTCGACCTCGAGAGTG 5533839 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131 | ||||| || |||| || || | ||| Sbjct 5533838 ATGGTCTTCCCCGTCAGGGTCTTCAAGAA 5533810 >seq265 Length=2252016 Score = 123 bits (136), Expect = 6e-23 Identities = 160/219 (73%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 || |||||| ||||| |||||||||||||| | |||| | |||| || || ||| | Sbjct 744510 GAATCTCAACACAAGATGAAGAGTGGACTCCTCTTGAGTGTTGTGGTC--CA--AGTACA 744455 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| || ||||| || || ||||| |||| ||| ||||| |||||||| ||||| Sbjct 744454 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTC 744395 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||| || || || ||| || || || | || ||||| ||| || || || || Sbjct 744394 CTTGTCCTGGATCTTGACCTTTACATTTTCTGTCGTATCCGAGGGTTCGACCTCGAGAGT 744335 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || |||| || || || || | ||||| Sbjct 744334 GACGGTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCAT 744296 >seq259 Length=1197011 Score = 113 bits (124), Expect = 1e-19 Identities = 156/217 (72%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| |||| |||||||||||| | |||||||| |||| || | ||| | Sbjct 605922 AGTCTCAACACAATATGAAGAGTGGACCCCTTTTGAATGTTGTGGTCAAACAAAGTACGT 605863 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| || || ||||| |||| || ||||| || | ||| ||||| Sbjct 605862 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGGGAAATTCCTTCC 605803 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 ||||| || || || ||| || || || | || ||||| ||| || || || || Sbjct 605802 TTGTCCTGGATCTTAGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTCGAGAGTG 605743 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCA 195139 | ||| ||||||||| || || ||||| | |||| Sbjct 605742 ATGGTC-TTCCTGTCAGGGTCTTCACGAAAATCTGCA 605707 >seq10 Length=27321270 Score = 111 bits (122), Expect = 3e-19 Identities = 142/194 (73%), Gaps = 5/194 (3%) Strand=Plus/Plus Query 194923 AGTCTCAAAAC-AAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 |||||||| | ||| |||||||||||||| |||||||| ||||| || | ||| | Sbjct 23648161 AGTCTCAACATTAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACG 23648216 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| | ||||| || || ||||| |||| ||| ||||| |||||||| ||||| Sbjct 23648217 TCCATCTTCCACTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTC 23648276 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || || || || || ||| || || || | || || || ||| |||||||| || Sbjct 23648277 CTTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCTGAGGGTTCAACTTCAAGAGT 23648336 Query 195102 AACCGTCTTTCCTG 195115 | ||| | |||| Sbjct 23648337 GATGGTCATCCCTG 23648350 >seq24 Length=21601121 Score = 98.7 bits (108), Expect = 2e-15 Identities = 112/149 (75%), Gaps = 1/149 (1%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || |||||||| || || |||||||| | || ||| | |||||||| Sbjct 9816188 ACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCATCTTCC 9816129 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || ||||| || || || | || ||||| || ||| |||||||||| || || Sbjct 9816128 AGCTGTTTGCCTGCAAACATGAGCCTCTGCTGGTCGGGGGGA-TGCCTTCTTTATCCTGG 9816070 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || ||| || |||| |||||||| Sbjct 9816069 ATCTTGGCCTTCACATTCTTGATGGTGTC 9816041 >seq4 Length=32345528 Score = 98.7 bits (108), Expect = 2e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || || |||||||| || || ||||||| | | |||| | |||||||| Sbjct 25269427 ACCAGGTGCAGGGTCGACTCTTTCTGGATGCTGTAATCAGAAGGAGTGCGGCCATCTTCC 25269368 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||| || ||||| ||||| || | || || || || || ||||||||||| || | Sbjct 25269367 AGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGATCAGGGGGGATGCCTTCTTTATCCTCG 25269308 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || ||| | |||||| |||||||| Sbjct 25269307 ATCTTGGCCTTCATGTTCTCGATGGTGTC 25269279 >seq8 Length=29698465 Score = 84.2 bits (92), Expect = 5e-11 Identities = 143/204 (70%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || || |||||||| || || |||||||| | |||||| | |||||||| | ||| Sbjct 12480163 GTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCATCTG 12480222 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || ||||| |||| || | || | ||| | |||| |||||||||| || || || || Sbjct 12480223 TTTGCCTGCAAAGAGGAGCCTCTGCTTGTCAGCAGGA-TGCCTTCTTTATCCTGGATCTT 12480281 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 || || ||||| | | | | | | ||||| || ||||| | ||||| | || Sbjct 12480282 GGCCTGCACATTCTC-AGGCTCGCTGGGC--TCCACCTCCAGGGTGATGGTCTTGCAGGT 12480338 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 || || || ||||| | ||||| Sbjct 12480339 CAGGGTCTTCACGAAGATCTGCAT 12480362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109457888991356