Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq84 134 9e-27 seq20 98.7 6e-16 seq62 89.7 3e-13 seq53 87.8 1e-12 seq33 82.4 5e-11 >seq84 Length=11797838 Score = 134 bits (148), Expect = 9e-27 Identities = 169/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||| || | || |||| ||| | ||| ||||||||| ||||| ||||| || Sbjct 5420822 CCTCCCCTTAAGCGCAGGACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGAC 5420763 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| ||||||||||| |||||||| || | | ||||||||| | || Sbjct 5420762 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGG 5420703 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | ||||||||||| |||||| ||||| || || || | |||| || ||| | Sbjct 5420702 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCCA 5420645 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || | ||| ||||| || || || | |||||||| |||||||||||| Sbjct 5420644 CCTCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCATA 5420595 Score = 116 bits (128), Expect = 2e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||| | ||| |||||||| ||||| ||||| || ||| | || |||| ||| Sbjct 5419746 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 5419687 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || || | ||||||||| | || | ||||| || || Sbjct 5419686 AGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTTTCTTGG 5419627 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| |||||| | || | |||| || ||| || || | ||| ||||| || Sbjct 5419626 ATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 5419567 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | |||||||| ||||||||||| Sbjct 5419566 CCAGTCAAGGTCTTCACGAAGATCTGCAT 5419538 >seq20 Length=22150888 Score = 98.7 bits (108), Expect = 6e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| || || || || | || |||| ||||||||||| || ||||| Sbjct 5019721 TCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAG 5019662 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || | ||||||||| | || | || ||||| || ||||| || ||| Sbjct 5019661 ATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTC 5019602 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | |||| || ||| || || | ||| ||||| || || || || |||||||| Sbjct 5019601 TCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACG 5019542 Query 34971 AAGATCTGCATATT 34984 ||||||||||| || Sbjct 5019541 AAGATCTGCATTTT 5019528 >seq62 Length=15298998 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 34766 CCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC 34825 |||||| || | |||| ||| || ||||||||||| ||||| || | | ||| | Sbjct 5534016 CCTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAACGTACGTCC 5533957 Query 34826 ATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34885 ||| ||||| || || || ||||| || |||| ||||||||| | || | || ||||| Sbjct 5533956 ATCTTCCAGGTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTT 5533897 Query 34886 GTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTAT 34945 ||| ||||| || ||| | ||| | || || || || |||| || || Sbjct 5533896 GTCCTGGATCTTGGCCTTTACGTTTTCTACTGCATCCGAGGGTTCGACCTCGAGAGTGAT 5533837 Query 34946 GGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 ||| || ||||| || ||||||| || |||||| ||| Sbjct 5533836 GGTCTTCCCCGTCAGGGTCTTCAAGAAAGTCTGCACATT 5533798 >seq53 Length=16102195 Score = 87.8 bits (96), Expect = 1e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 ||||| || | |||| ||| || || |||||||| | ||| || | | ||| || Sbjct 15465288 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTGGTCAGACAAAGTACGTCCA 15465347 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || |||||||| || || ||||| || |||| ||||||||| | || | | |||||| Sbjct 15465348 TCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTACTTCCTTG 15465407 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||| || | | | || | | || || || || |||| || ||| Sbjct 15465408 TCCTGGATCTTGGCCTTTATGTTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGTGATG 15465467 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATTCGT 34987 || || ||||| || |||||||| || ||||||||||| || Sbjct 15465468 GTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATTGGT 15465508 >seq33 Length=16598743 Score = 82.4 bits (90), Expect = 5e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 ||||| || | |||| ||| || || |||||||| ||||| || || | ||| || Sbjct 8627170 CTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCAGACAGAGTACGTCCA 8627111 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 | ||| | || || || ||||| || |||| ||| ||||| | || | || |||||| Sbjct 8627110 TTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGAATTCCTTCCTTG 8627051 Query 34887 TCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || ||||| || || | |||| | || || | || |||| || ||| Sbjct 8627050 TCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACCTCGAGAGTGATG 8626991 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || || ||||| || |||||||| || ||||||||||| Sbjct 8626990 GTCTTCCCCGTCAGGGTCTTCACGAATATCTGCATATT 8626953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324627000604704