Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_016447.1 Length=219474 Score E Sequences producing significant alignments: (Bits) Value seq215 104 3e-17 >seq215 Length=2740087 Score = 104 bits (114), Expect = 3e-17 Identities = 138/189 (73%), Gaps = 6/189 (3%) Strand=Plus/Minus Query 197458 GCTTTAGCATTTGCCAATCCTAAAGACGTTACCATAATGGATAAAAGCTACCAGGGTCGT 197517 ||||||||| ||| || | ||||| ||| | |||| || |||||||||||||| || Sbjct 460328 GCTTTAGCAGATGC-AAGCGGAAAGA--TTATCTTAATAGACAAAAGCTACCAGGGGCGA 460272 Query 197518 GTCAACATTAGCCAAACCAACTACTCTTTGTGCATTAGGAACCTGACCGTGAATGATGCT 197577 | ||| | | ||| ||| |||| |||| || | || ||||| |||| ||||| Sbjct 460271 ATAAACGTCACCCA---GAACAACTCCTTGTCTATCAACAAGCTGACTCTGAAAGATGCA 460215 Query 197578 GGTTCGTATAAGGCCCAAATTAACAAAAATAATTCCCAAGTCACCACCAAGGAGGAATTT 197637 || || || || ||||| || ||| |||| ||||| |||||||||| | ||| |||| Sbjct 460214 GGATCCTACAAAGCCCAGATAAACCAAAAGAATTCTAAAGTCACCACAAGTGAGAAATTC 460155 Query 197638 ACTCTGTCT 197646 || |||||| Sbjct 460154 ACCCTGTCT 460146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 702174159363520