Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq82 107 4e-18 seq71 87.8 3e-12 >seq82 Length=8814989 Score = 107 bits (118), Expect = 4e-18 Identities = 152/209 (73%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 25859 AGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCA 25918 |||| ||||||| || || || | ||||||||||| || | ||| || ||||| || Sbjct 1281503 AGAG-GCTACGTACGGAGAACGTGTCGTAGCCTTTGCCGCAGCGGAAGGAATCTTCTTTT 1281445 Query 25919 GCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTAC 25977 ||||| ||||| | | || ||||||||| | | | |||| |||| |||| || Sbjct 1281444 CTGGTTCTTTTGCATCTGTATTGTGGCTCAAGAA-ACGAGGACTCATGTCCGGCCTCACA 1281386 Query 25978 TTTTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTC 26037 |||||||| || || || ||||| ||||||||| | ||| | || |||||||||||| | Sbjct 1281385 TTTTCCAATGAACTTATTAGCAGAGACGAGGGTTTACACTGTGACTTTGCCTGCCTGATG 1281326 Query 26038 TACACGGGCCACTTGCTCCACAAACCTTC 26066 | || ||| |||| ||||||| ||| Sbjct 1281325 TTCA---AACACCTGCTACACAAACGTTC 1281300 >seq71 Length=10149521 Score = 87.8 bits (96), Expect = 3e-12 Identities = 100/129 (78%), Gaps = 4/129 (3%) Strand=Plus/Plus Query 25880 GGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCT 25939 || |||| |||||||||||||| || || || || ||| || || ||||| || || | Sbjct 1782160 GGGTGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCGGGATCTTTTGCTGCTATAT 1782219 Query 25940 TCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTAC-TTTTCCAACGAGCTCATCAG 25997 ||||||| ||| | ||| |||| ||||| || || ||| |||||||| || |||||||| Sbjct 1782220 TCTGGCTAAAG-AAAAGAGGACTTATGCCTGGACT-TACTTTTTCCAATGAACTCATCAG 1782277 Query 25998 CAGGGACGA 26006 ||| || || Sbjct 1782278 CAGAGATGA 1782286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928825433585920