Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq84 163 6e-35 seq20 159 7e-34 seq33 141 2e-28 seq61 136 8e-27 seq27 134 3e-26 seq265 132 9e-26 seq53 123 5e-23 seq10 122 2e-22 seq259 118 2e-21 seq62 116 7e-21 seq85 113 9e-20 seq166 96.9 7e-15 seq35 96.9 7e-15 >seq84 Length=11797838 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 |||||| || || ||||| || | ||||||||| ||||||||||| || || || ||||| Sbjct 5420823 ACCTCCCCTTAAGCGCAGGACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGA 5420764 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | | || ||||| || ||||| || |||||||| | || || || ||||| || Sbjct 5420763 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGG 5420704 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || || ||||| || || ||||| || || ||||| || || || ||| | || || || Sbjct 5420703 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCAC 5420644 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||| || || |||||||| ||||| ||||| || || |||||||| Sbjct 5420643 CTCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 5420596 Score = 129 bits (142), Expect = 1e-24 Identities = 140/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || |||| ||| || || | |||||| || || |||||||| || || ||||||| Sbjct 5420596 TACCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAG 5420537 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || ||||| || ||||| || |||||||| || || || || ||||| | Sbjct 5420536 AAAGAGTGCGGCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGG 5420477 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| || ||||| || || || || || || || ||| | || || | Sbjct 5420476 GGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCA 5420417 Query 82762 CTTCCA 82767 | |||| Sbjct 5420416 CCTCCA 5420411 >seq20 Length=22150888 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 || || |||| ||| || || | |||||| || || |||||||| || || |||||||| Sbjct 5019757 CCACCCCTCAGACGAAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAG 5019698 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || ||||| || ||||| || |||||||| || || || || ||||| || Sbjct 5019697 AGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 5019638 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 || ||||||||||| || ||||| || || || || || || || ||| | || || || Sbjct 5019637 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 5019578 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 |||| || || |||||||| |||| ||||| || || ||||||||| Sbjct 5019577 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATT 5019530 >seq33 Length=16598743 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| | || || || || || || ||||| ||| | | || | ||| |||| Sbjct 8627158 TGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCAGACAGAGTACGTCCATTTTCCCGTTGC 8627099 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| |||||||| || || ||||| ||||||||||| || || ||||| Sbjct 8627098 TTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTG 8627039 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||||||||| || ||||| |||| || || | ||| || ||||| || ||| Sbjct 8627038 GCCTTTACATTTTCTATTGTATCCGAGGGTTTGACCTCGAGAGTGATGGTCTTCCCCGTC 8626979 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| || ||||||||||| Sbjct 8626978 AGGGTCTTCACGAATATCTGCAT 8626956 >seq61 Length=12256116 Score = 136 bits (150), Expect = 8e-27 Identities = 149/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 82613 AGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCC 82672 |||||| || || || || || || ||||| | | | | || ||||| ||||| || || Sbjct 4027251 AGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCC 4027310 Query 82673 AGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTT 82732 ||||||| |||||||| | || || | ||| ||| ||||||||||||| ||||| || || Sbjct 4027311 AGCAAAGGTTAGTCTTCGCTGGTCAGAAGGAATTACTTCCTTATCTTGGATCTTGGCCTT 4027370 Query 82733 TACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGT 82792 ||||||||| || ||||| ||||| || || | ||| | ||||| |||||| | Sbjct 4027371 TACATTTTCTATTGTATCTGAGGGTTCGACCTCGAGAGTGGTGGTCTTCCCTGTCCGGAT 4027430 Query 82793 CTTTACAAATATCTGCAT 82810 ||| | ||| |||||||| Sbjct 4027431 CTTCATAAAAATCTGCAT 4027448 >seq27 Length=17078927 Score = 134 bits (148), Expect = 3e-26 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 82617 GATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCA 82676 || || || || || || || ||||| | | | || || || ||||| || |||||| Sbjct 16539941 GACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGGCCATCCTCCAGTTGCTTGCCAGCA 16540000 Query 82677 AAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACA 82736 ||||| |||||||| || || ||||| |||||||| |||||||| ||||| || |||||| Sbjct 16540001 AAGATCAGTCTTTGCTGGTCAGGAGGGATTCCTTCTTTATCTTGGATCTTGGCCTTTACA 16540060 Query 82737 TTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTT 82796 ||||| || ||||| |||||| || | | ||| || ||||| ||||||| ||||| Sbjct 16540061 TTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGATGGTCTTCCCTGTCAGGGTCTTC 16540120 Query 82797 ACAAATATCTGCAT 82810 || |||||||| Sbjct 16540121 CTGAAAATCTGCAT 16540134 >seq265 Length=2252016 Score = 132 bits (146), Expect = 9e-26 Identities = 124/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| ||||| || ||||||||||| |||||||| || || ||||| ||||||||| Sbjct 744453 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 744394 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 || || || ||||| | ||||||||||| ||||||| ||||| || || | ||| Sbjct 744393 TTGTCCTGGATCTTGACCTTTACATTTTCTGTCGTATCCGAGGGTTCGACCTCGAGAGTG 744334 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | ||||| || |||| ||||| ||||| |||||||| Sbjct 744333 ACGGTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCAT 744296 >seq53 Length=16102195 Score = 123 bits (136), Expect = 5e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || || || || || | ||||| | | | | || ||||| || || Sbjct 15465300 TGAAGAGTGGACTCCTTTTGAATGTTGTGGTCAGACAAAGTACGTCCATCTTCCAGCTGC 15465359 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| |||||||| || || ||||| ||| ||||||| || || ||||| Sbjct 15465360 TTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTACTTCCTTGTCCTGGATCTTG 15465419 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || |||| ||||| | ||||| ||||| || || | ||| || ||||| || ||| Sbjct 15465420 GCCTTTATGTTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGTGATGGTCTTCCCCGTC 15465479 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| Sbjct 15465480 AGGGTCTTCACGAAAATCTGCAT 15465502 >seq10 Length=27321270 Score = 122 bits (134), Expect = 2e-22 Identities = 122/157 (78%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| | ||| || ||||||||||| |||||||| || || ||||| ||||||||| Sbjct 23648218 CCATCTTCCACTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCC 23648277 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 ||||| || ||||| || ||||||||||| | ||||| ||||| ||||| | ||| Sbjct 23648278 TTATCCTGGATCTTGGCCTTTACATTTTCTGTTGTATCTGAGGGTTCAACTTCAAGAGTG 23648337 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCA 82809 || ||| | |||| || ||||| | || ||||||| Sbjct 23648338 ATGGTCATCCCTG-GAAGGTCTTCATGAAAATCTGCA 23648373 >seq259 Length=1197011 Score = 118 bits (130), Expect = 2e-21 Identities = 121/157 (77%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 || ||||| ||||| || ||||||||||| ||||| || || || || | ||||||||| Sbjct 605862 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGGGAAATTCCTTCC 605803 Query 82713 TTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTT 82772 || || || ||||| || ||||||||||| | ||||| ||||| || || | ||| Sbjct 605802 TTGTCCTGGATCTTAGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTCGAGAGTG 605743 Query 82773 ATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCA 82809 || ||||| ||||||| ||||| || || ||||||| Sbjct 605742 ATGGTCTT-CCTGTCAGGGTCTTCACGAAAATCTGCA 605707 >seq62 Length=15298998 Score = 116 bits (128), Expect = 7e-21 Identities = 147/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || ||||| || || ||||| || || || ||||| | | | || ||||| || || Sbjct 5534003 TGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAACGTACGTCCATCTTCCAGGTGC 5533944 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||| |||||||| || || ||||| ||||||||||| || || ||||| Sbjct 5533943 TTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTG 5533884 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || ||||| ||||| | | ||| ||||| || || | ||| || ||||| || ||| Sbjct 5533883 GCCTTTACGTTTTCTACTGCATCCGAGGGTTCGACCTCGAGAGTGATGGTCTTCCCCGTC 5533824 Query 82788 AACGTCTTTACAAATATCTGCA 82809 | ||||| | || |||||| Sbjct 5533823 AGGGTCTTCAAGAAAGTCTGCA 5533802 >seq85 Length=9129030 Score = 113 bits (124), Expect = 9e-20 Identities = 148/204 (73%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 ||||| || || |||||||| || || | |||||| ||| | || ||||| || || Sbjct 2104088 TGCAGGGTCGACTCTTTCTGGATGTTGTGATCAGAAAGAGTGTGGCCATCTTCCAGCTGC 2104147 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || || |||||||| | || ||||| || ||||| | ||||||||||| || ||||| Sbjct 2104148 TTGCCTGCAAAGATGAACCTCTGTTGTTCGGGAGGC-TGCCTTCCTTATCCTGGATCTTG 2104206 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || || ||||| || | ||| | || ||||| |||| || || ||||||| | | Sbjct 2104207 GCCTTCACATTCCTGATGATGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCTGGCC 2104266 Query 82788 AACGTCTTTACAAATATCTGCATT 82811 || ||||| || || || |||||| Sbjct 2104267 AAGGTCTTCACGAAGATTTGCATT 2104290 >seq166 Length=5848183 Score = 96.9 bits (106), Expect = 7e-15 Identities = 148/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 82599 AGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCT 82658 || || ||||| || || ||||||||||| |||||||| || || ||| | | || || Sbjct 1459266 AGCACCAAGTGTAGGGTGGATTCTTTCTGGATATTATAGTCTGAGAGAGTACGGCCATCC 1459207 Query 82659 TCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCT 82718 || || ||||| | ||||| || || || ||||| | || | || | || | ||| Sbjct 1459206 TC-AGCTGTTTGTCTGCAAAAATCAGACTCTGTTGGTGAGGCAGGATGTCCTCAGTGTCT 1459148 Query 82719 TGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTC 82778 | || || ||||| ||||| ||| | || || | ||| || || | ||| || ||| Sbjct 1459147 TTGATTTTGGCTTTGACATTCTCAGTGGTGACACTGAGTTTGACCTCAAGAGTGATGGTC 1459088 Query 82779 TTGCCTGTCAACGTCTTTACAAATATCTGC 82808 ||||| |||| ||||| ||||| || ||| Sbjct 1459087 TTGCCCGTCAGGGTCTTCACAAAGATTTGC 1459058 >seq35 Length=15412958 Score = 96.9 bits (106), Expect = 7e-15 Identities = 122/168 (73%), Gaps = 5/168 (3%) Strand=Plus/Plus Query 60155 TGGTGGTACTATATATCTAAAGGTATAGAATACTTAGATACGGTGTTTTTCATACTTAGG 60214 |||||||||| ||| |||||||| || || || || || || |||||||| || || ||| Sbjct 5682696 TGGTGGTACTTTATTTCTAAAGGAATTGAGTATTTGGACACAGTGTTTTTTATCCTGAGG 5682755 Query 60215 AAAAAGTTTAATCAGGTTAGTTTTTTACACGTATATCATCATTTTACTATGTTTACTTTA 60274 || || || || || || | |||||||||||||| | ||| |||||||| || Sbjct 5682756 AAGAAAAACAACCAAGTCTCCTTCCTTCACGTATATCATCACTGTACAATGTTTACATTG 5682815 Query 60275 GGATGGGTAGGCATTAAATGGTTTGCCGGAGGTCA-----AGCATTTT 60317 | ||| | || ||||| ||| |||| || || || |||||||| Sbjct 5682816 TGGTGGATTGGAATTAAGTGGGTTGCAGGGGGACAGGGTGAGCATTTT 5682863 Score = 84.2 bits (92), Expect = 4e-11 Identities = 97/129 (75%), Gaps = 4/129 (3%) Strand=Plus/Plus Query 60309 AAGCATTTTTCGGAGCTCAGTTGAATTCCTTAATCCATGTTATTATGTATACTTAT--TA 60366 |||||||||||||||| ||| |||||||||| |||||||| |||||| ||||||| || Sbjct 5683913 AAGCATTTTTCGGAGCCCAGATGAATTCCTTCATCCATGTGATTATG--TACTTATACTA 5683970 Query 60367 TGGTATGGCGGCGTGTGGACCTATGTTTAAAAAGTATTTATGGTGGAAGCGTTATCTTAC 60426 || | | || | ||| || | || | |||||| | |||||||| || || || || Sbjct 5683971 CGGGTTAACCGCCTTTGGCCCATGGATTCAGAAGTATCTTTGGTGGAAACGATACCTGAC 5684030 Query 60427 TATAATGCA 60435 || |||| Sbjct 5684031 CATGCTGCA 5684039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981806217125452