Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq20 136 4e-27 seq84 113 4e-20 seq34 113 4e-20 seq8 95.1 1e-14 seq62 87.8 2e-12 seq265 86.0 6e-12 seq24 86.0 6e-12 seq85 84.2 2e-11 seq53 82.4 7e-11 >seq20 Length=22150888 Score = 136 bits (150), Expect = 4e-27 Identities = 151/199 (76%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || |||||||| | ||| | | | || || ||||| |||| Sbjct 5019728 GGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCA-TCTTCCAGCTGTTTGC 5019670 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| ||||||||| || |||||||||||||| || |||||| || Sbjct 5019669 CTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCT 5019610 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | ||||| |||||||||| || | ||||| ||| ||||||||||| | Sbjct 5019609 TCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGG 5019550 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 5019549 TCTTCACGAAGATCTGCAT 5019531 >seq84 Length=11797838 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||||||||| || ||||| || || ||| | || || ||||| || || Sbjct 5419734 GTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCG 5419675 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || |||| ||||||||| || |||||||| || || || |||||| |||| Sbjct 5419674 GCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCTTTTTCTTGGATCTTCCCCTTG 5419615 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||| | ||||| |||||||||| || | ||||| ||| || || |||| || Sbjct 5419614 ACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTC 5419555 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 5419554 TTCACGAAGATCTGCAT 5419538 Score = 89.7 bits (98), Expect = 5e-13 Identities = 121/166 (73%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || |||||||| | ||| | | | || || ||||| || | Sbjct 5420565 GGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCAGCTGTTTCC 5420507 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || |||||||||||||| || |||||| || Sbjct 5420506 CGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCT 5420447 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGT 133627 | | | ||| | ||||| |||||||||| || | ||||| ||| Sbjct 5420446 TCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 5420401 >seq34 Length=14701056 Score = 113 bits (124), Expect = 4e-20 Identities = 144/197 (73%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || |||||||||| || |||||||| | ||| ||| || ||||| ||||| Sbjct 8730378 GTCGACTCTTTCTAGATGTTGTAATCAGAAAGAGTGTGGCCGTCTTCCAGCTGTTTGCCT 8730319 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | ||||||| ||||||||| || |||||||||| ||| || |||||| ||| Sbjct 8730318 GCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTT-CTTATCCTGGATCTTGGCCTTC 8730260 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||| | ||||| ||| |||||| || | |||||| || ||||| ||||| || Sbjct 8730259 ATGTTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGACAGTCTTGCCAGTCAGGGTC 8730200 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 8730199 TTCACGAAGATCTGCAT 8730183 >seq8 Length=29698465 Score = 95.1 bits (104), Expect = 1e-14 Identities = 143/199 (72%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || |||||||| | ||| | | | || || | ||| |||| Sbjct 12480169 GGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCCATCTGTTTGC 12480227 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | | ||||| ||||| ||| | | |||||||||| || || |||||| || Sbjct 12480228 CTGCAAAGAGGAGCCTCTGCTTGTCAGCA-GGATGCCTTCTTTATCCTGGATCTTGGCCT 12480286 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | |||| | ||| |||||||||| || | ||||| ||| |||| |||||| | Sbjct 12480287 GCACATTCTCA---GGCTCGCTGGGCTCCACCTCCAGGGTGATGGTCTTGCAGGTCAGGG 12480343 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 12480344 TCTTCACGAAGATCTGCAT 12480362 >seq62 Length=15298998 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| || || ||| | | | || || || |||||||| Sbjct 5533997 GTGGACTCCTTCTGAATGTTGTAGTCAGACAACGTACGTCCA-TCTTCCAGGTGCTTGCC 5533939 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || || | |||||||| ||||| || ||||||||||| |||||| ||| Sbjct 5533938 TGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGGATCTTGGCCTT 5533879 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || || | || | ||| || || |||| |||| ||| || || ||||| || Sbjct 5533878 TACGTTTTCTACTGCATCCGAGGGTTCGACCTCGAGAGTGATGGTCTTCCCCGTCAGGGT 5533819 Query 133643 TTTTACGAAAATCTGCA 133659 || | |||| |||||| Sbjct 5533818 CTTCAAGAAAGTCTGCA 5533802 >seq265 Length=2252016 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || || |||||||| || | || || | |||||||| ||||| || ||||||||| Sbjct 744450 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTG 744391 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | || ||| || | ||| || || |||| |||||| Sbjct 744390 TCCTGGATCTTGACCTTTACATTTTCTGTCGTATCCGAGGGTTCGACCTCGAGAGTGACG 744331 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||| || || || ||||||||||| Sbjct 744330 GTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCAT 744296 >seq24 Length=21601121 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/151 (74%), Gaps = 3/151 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||||||||| || |||||||| || ||| | | | || || ||||| |||| Sbjct 9816177 GGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGTGCGGCCA-TCTTCCAGCTGTTTGC 9816119 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | ||||||| |||||||||||| ||||||||||| || || |||||| || Sbjct 9816118 CTGCAAACATGAGCCTCTGCTGGTCGGG-GGGATGCCTTCTTTATCCTGGATCTTGGCCT 9816060 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCAC 133612 | | | || | ||||| |||||||||| Sbjct 9816059 TCACATTCTTGATGGTGTCACTGGGCTCCAC 9816029 >seq85 Length=9129030 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/205 (70%), Gaps = 3/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | ||| ||||||||||| || |||| ||| | ||| | | | || || |||| Sbjct 2104087 ATGCAGGGTCGACTCTTTCTGGATGTTGTGATCAGAAAGAGTGTGGCCA-TCTTCCAGCT 2104145 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 ||||||| || | |||| || ||| || |||||| || |||||||||| || ||||| Sbjct 2104146 GCTTGCCTGCAAAGATGAACCTCTGTTGTTCGGGA-GGCTGCCTTCCTTATCCTGGATCT 2104204 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||| | | | | |||| ||||||| || || | ||||| ||| |||| || Sbjct 2104205 TGGCCTTCACATTCCTGATGATGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCTGG 2104264 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||| || ||||| Sbjct 2104265 CCAAGGTCTTCACGAAGATTTGCAT 2104289 >seq53 Length=16102195 Score = 82.4 bits (90), Expect = 7e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || ||||||||||| || | || || | |||||||| ||||| || |||||||| Sbjct 15465348 TCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTACTTCCTTG 15465407 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | || || || | ||| || || |||| |||| | Sbjct 15465408 TCCTGGATCTTGGCCTTTATGTTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGTGATG 15465467 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || ||||| || || |||||||||||||| Sbjct 15465468 GTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 15465502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483410720676320