Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq62 129 1e-24 seq53 120 7e-22 seq33 114 3e-20 seq61 113 1e-19 seq259 111 4e-19 seq10 105 2e-17 seq27 96.9 8e-15 seq84 95.1 3e-14 seq265 91.5 3e-13 seq20 84.2 5e-11 >seq62 Length=15298998 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || |||||| | || || ||| || || |||| ||| Sbjct 5533816 AAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCGGATGCAGTAGAAAAC 5533875 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || ||||||||| || ||| |||||||| ||||| Sbjct 5533876 GTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAGCAAAGACTGATCTTT 5533935 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | || ||| | || |||||| | ||||| ||||| Sbjct 5533936 GCAGGCAAGCACCTGGAAGATGGACGTACGTTGTCTGACTACAACATTCAGAAGGAGTCC 5533995 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| ||||| ||||| Sbjct 5533996 ACTCTTCATCTTGTGTTGAGGCTTCG 5534021 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||| ||||| ||||| |||||||| ||||| ||||| | || ||||||| ||| || Sbjct 5534021 CGAAGCCTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAACGTA 5533962 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | |||||||||||| ||||| || || ||||| || | ||| || Sbjct 5533961 CGTCCATCTTCCAGGTGCTTGCCTGCAAAGATCAGTCTTTGCTG 5533918 >seq53 Length=16102195 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || |||||| | || || ||| || || ||| ||| Sbjct 15465487 AAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCGGATACAACAGAAAAC 15465428 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 ||||| ||||| || || || |||| |||| || ||| |||||||| ||||| Sbjct 15465427 ATAAAGGCCAAGATCCAGGACAAGGAAGTAATTCCTCCTGACCAGCAAAGACTGATCTTT 15465368 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| ||||||||||| | |||||| | || ||||| | || || ||||| Sbjct 15465367 GCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCTGACCACAACATTCAAAAGGAGTCC 15465308 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| ||||| ||||||||||| Sbjct 15465307 ACTCTTCATCTTGTGTTGAGACTTCG 15465282 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| ||||| |||||||| ||||| || || | || | ||||| |||||| Sbjct 15465282 CGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTGGTCAGACAAAGTA 15465341 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | |||||||||||||||||| || || ||||| || | ||| || Sbjct 15465342 CGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTG 15465385 >seq33 Length=16598743 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 |||||||| || || || || || || || |||||| | || || || || || Sbjct 8626959 CAGATATTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCAAACCCTCGGAT 8627018 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| |||||| ||||| || || || ||||||||| || ||| ||| Sbjct 8627019 ACAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCACCAA 8627078 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| ||||| || || ||||| |||| ||||| | ||| || | || |||||| | Sbjct 8627079 AGACTGATCTTTGCTGGCAAGCAACGGGAAAATGGACGTACTCTGTCTGACTACAACATT 8627138 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 || || ||| | |||||||| ||||| ||||||||||| Sbjct 8627139 CAAAAGGAGCCCACTCTTCATCTTGTGTTGAGACTTCG 8627176 >seq61 Length=12256116 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 ||||| || || | |||| | || || ||| || || ||| | ||| |||||| Sbjct 4027424 ACAGGGAAGACCACCACTCTCGAGGTCGAACCCTCAGATACAATAGAAAATGTAAAGGCC 4027365 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||| || |||| |||| | ||| | |||||| | ||| || || ||| Sbjct 4027364 AAGATCCAAGATAAGGAAGTAATTCCTTCTGACCAGCGAAGACTAACCTTTGCTGGCAAG 4027305 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || ||||||||||| | |||||| | || |||||| | || || ||||||||| |||| Sbjct 4027304 CAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTCAAAAGGAGTCTACTTTTCAT 4027245 Query 206374 CTTGTTTTGAGACTTCG 206390 ||| | ||||||||||| Sbjct 4027244 CTTCTGTTGAGACTTCG 4027228 Score = 86.0 bits (94), Expect = 1e-11 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 ||||||||||| | ||| |||| ||||||||| || || | || ||||||| |||||| Sbjct 4027228 CGAAGTCTCAACAGAAGATGAAAAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTA 4027287 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAG 204841 | |||||||||||| ||||| || || ||| Sbjct 4027288 CGTCCATCTTCCAGTTGCTTGCCAGCAAAG 4027317 >seq259 Length=1197011 Score = 111 bits (122), Expect = 4e-19 Identities = 149/206 (72%), Gaps = 1/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || ||||||| | | |||||| | || || ||| || || ||| ||| Sbjct 605721 AAGACCCTGACAGGAAGACC-ATCACTCTCGAGGTTGAACCCTCGGATACAAAAGAAAAT 605779 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || |||||||||| || ||| || ||||| ||||| Sbjct 605780 GTAAAGGCTAAGATCCAGGACAAGGAAGGAATTTCCCCTGACCAGCAGAGACTGATCTTT 605839 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| | |||||| || ||||| | || || | ||| Sbjct 605840 GCTGGCAAGCAACTGGAAGATGGACGTACTTTGTTTGACCACAACATTCAAAAGGGGTCC 605899 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||||| |||| ||||||||||| Sbjct 605900 ACTCTTCATATTGTGTTGAGACTTCG 605925 >seq10 Length=27321270 Score = 105 bits (116), Expect = 2e-17 Identities = 142/196 (72%), Gaps = 5/196 (3%) Strand=Plus/Minus Query 206195 CAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAA 206254 |||| | || |||||| | ||||| ||| || || ||| ||| |||||| | Sbjct 23648350 CAGGGATGACCATCACTCTTGAAGTTGAACCCTCAGATACAACAGAAAATGTAAAGGCCA 23648291 Query 206255 AGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGC 206314 |||| || || || ||||||||| || ||| |||||||| ||||| || || |||| Sbjct 23648290 AGATCCAGGATAAGGAAGGAATTCCTCCTGACCAGCAAAGACTGATCTTTGCTGGCAAGC 23648231 Query 206315 AGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACC 206374 | ||||||||||| | ||||| || |||||| | || || ||||| |||||||| | Sbjct 23648230 AAGTGGAAGATGGACGTACTTT----GACTACAACATTCAAAAGGAGTCCACTCTTCATC 23648175 Query 206375 TT-GTTTTGAGACTTC 206389 || | |||||||||| Sbjct 23648174 TTAATGTTGAGACTTC 23648159 >seq27 Length=17078927 Score = 96.9 bits (106), Expect = 8e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || | || || || ||||| || || |||||| | | || ||| ||| || Sbjct 16540131 CAGATTTTCAGGAAGACCCTGACAGGGAAGACCATCACTCTCAAGGTTGAACCTTCAGAT 16540072 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| |||||| ||||| ||||| ||||||||||| || ||| ||| Sbjct 16540071 ACAATAGAAAATGTAAAGGCCAAGATCCAAGATAAAGAAGGAATCCCTCCTGACCAGCAA 16540012 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| ||||| || || ||||| |||| ||||| |||||| | || |||||| | Sbjct 16540011 AGACTGATCTTTGCTGGCAAGCAACTGGAGGATGGCCATACTTTGTCTGACTACAACATT 16539952 Query 206353 CAGAAAGAGTC 206363 || || ||||| Sbjct 16539951 CAAAAGGAGTC 16539941 >seq84 Length=11797838 Score = 95.1 bits (104), Expect = 3e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAA 206253 || || || || ||||| |||| ||||| |||||| |||| || ||| Sbjct 5419562 ACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAACGTCAAGGGG 5419621 Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| ||||||||||| || || || ||| || || || ||||| ||||| || Sbjct 5419622 AAGATCCAAGAAAAAGAGGGCATCCCCCCAGACCAGCAGAGGCTGATCTTTGCCGGGAAA 5419681 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| |||||||||| | || || | || |||||| ||||||||||||| ||||| ||| Sbjct 5419682 CAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACATCCAGAAAGAGTCCACTCTGCAC 5419741 Query 206374 CTTGT 206378 || || Sbjct 5419742 CTGGT 5419746 Score = 84.2 bits (92), Expect = 5e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 206203 ACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAA 206262 || ||||| |||| ||||| |||||| |||| || ||| ||||| || Sbjct 5420401 ACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAACGTGAAGGCCAAGATCCAG 5420460 Query 206263 GAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAA 206322 || || ||||| || || ||| || || || ||||| ||||| || ||| ||||| Sbjct 5420461 GATAAGGAAGGCATCCCCCCAGACCAGCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAA 5420520 Query 206323 GATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| | ||| | | ||||||||| ||||||||||||| || || ||||| || Sbjct 5420521 GATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCGACCCTGCACCTGGT 5420576 >seq265 Length=2252016 Score = 91.5 bits (100), Expect = 3e-13 Identities = 148/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || || || || || || ||||| | || || ||| || || Sbjct 744299 CAGATTTTTGTGAAGACCCTGACGGGGAAGACCGTCACTCTCGAGGTCGAACCCTCGGAT 744358 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||| |||||| ||||| || || || ||||||||| || ||| ||| Sbjct 744359 ACGACAGAAAATGTAAAGGTCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAGCAA 744418 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| ||||| || || ||||| ||||||||||| | |||| | || ||||| Sbjct 744419 AGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTGGACC----ACAACACT 744474 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || | ||||| |||||||| ||||| |||||| Sbjct 744475 CAAGAGGAGTCCACTCTTCATCTTGTGTTGAGA 744507 >seq20 Length=22150888 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| |||||| |||| Sbjct 5019546 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAGAAC 5019605 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || ||||| || || ||| || || || ||||| Sbjct 5019606 GTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCAGACCAGCAGAGGCTCATCTTT 5019665 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || || ||| |||||||||| | ||| | | ||||||||| ||||||||||||| Sbjct 5019666 GCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTACAACATCCAGAAAGAGTCG 5019725 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 5019726 ACCCTGCACCTGGT 5019739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181795543012228