Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq185 116 1e-22 seq281 107 6e-20 seq163 104 7e-19 seq2 104 7e-19 seq276 98.7 3e-17 seq84 98.7 3e-17 seq57 98.7 3e-17 seq7 98.7 3e-17 >seq185 Length=2901000 Score = 116 bits (128), Expect = 1e-22 Identities = 69/72 (96%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1889843 GCTGAAATAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1889902 Query 2829 CCGGGCTTCAGC 2840 ||||| |||||| Sbjct 1889903 CCGGGTTTCAGC 1889914 >seq281 Length=1713358 Score = 107 bits (118), Expect = 6e-20 Identities = 67/72 (93%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 923922 GCCGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 923863 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 923862 CCGGGTTTCGGC 923851 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct 1485242 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 1485183 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1485182 CCGGGTTTCGGC 1485171 Score = 102 bits (112), Expect = 3e-18 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 896747 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 896806 Query 2827 CCCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 896807 TCCCGGGTTTCGGC 896820 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||||||||||| |||||| | | Sbjct 940416 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCTTGGTTCGATC 940475 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 940476 CCGGGTTTCGGC 940487 Score = 93.3 bits (102), Expect = 1e-15 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 2772 GAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCG 2831 ||| |||||||| || ||||||||||||||||||||||||||||||||||||||| ||| Sbjct 917613 GAAATAGCTCAGCTGAGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAATCCCT 917672 Query 2832 GGCTTCAGC 2840 || ||| || Sbjct 917673 GGTTTCGGC 917681 >seq163 Length=3663281 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1502179 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCCATC 1502238 Query 2829 CCGGGCTTCAGC 2840 | ||| |||||| Sbjct 1502239 CTGGGTTTCAGC 1502250 >seq2 Length=38736517 Score = 104 bits (114), Expect = 7e-19 Identities = 66/72 (92%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 |||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 14040195 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 14040254 Query 2829 CCGGGCTTCAGC 2840 ||||| | |||| Sbjct 14040255 CCGGGTTACAGC 14040266 >seq276 Length=1435099 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 600126 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 600185 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 600186 CCGGGTTTCGGC 600197 >seq84 Length=11797838 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 5408212 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 5408271 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 5408272 CCGGGTTTCGGC 5408283 >seq57 Length=15932029 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 15367044 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 15366985 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 15366984 CCGGGTTTCGGC 15366973 >seq7 Length=31971148 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||| |||||||||||||||||| | Sbjct 27217882 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATTTAAAGGTCCCTGGTTCAATC 27217823 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 27217822 CCGGGTTTCGGC 27217811 Score = 93.3 bits (102), Expect = 1e-15 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||| ||||||||||||||| |||||||||||||||| | | Sbjct 27223637 GCCGAAATAGCTCAGTTGGGAGACCATTAGACTGAAGATTTAAAGGTCCCTGGTTCGATC 27223578 Query 2829 CCGGGCTTC 2837 ||||| ||| Sbjct 27223577 CCGGGTTTC 27223569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15849310843860