Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq49 273 3e-68 seq58 174 2e-38 seq83 159 4e-34 seq202 140 4e-28 seq166 136 5e-27 >seq49 Length=12320750 Score = 273 bits (302), Expect = 3e-68 Identities = 252/319 (79%), Gaps = 0/319 (0%) Strand=Plus/Minus Query 171072 GTGGTGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTG 171131 |||| |||||| |||| || | | |||||||| | || || || | | |||||| ||| Sbjct 2444234 GTGGAGACCCAAGATGTAAGAGAGTTGCTGAACGCACCTGCTTCTTTAAGATGCTCTCTG 2444175 Query 171132 CAGACTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAG 171191 || | | | ||||| || ||||||| || ||||| ||||||||| | | ||||| Sbjct 2444174 CAAAATCCCCAGGAAGTTTTGATTGTGACATGGCAAAAAATCAAGGCTGTAAGCCCAGAA 2444115 Query 171192 AACATGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAG 171251 |||||||| || |||||| | |||| ||||| || |||||||| || |||||||| ||| Sbjct 2444114 AACATGATCACCTTTAGCCAGAACCATGGGGTTGTAGTCCAGCCTGCCTATAAGGATAAG 2444055 Query 171252 ATAAACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTA 171311 ||||||||||||||||| |||||| ||||||||||| || || |||||||||||||| Sbjct 2444054 ATAAACATCACCCAGCTGGGACTCATGAACTCAACCATTACCTTCTGGAATACCACCTTG 2443995 Query 171312 GAGGACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGG 171371 || ||||| ||||| ||||| |||||||| || |||||||| |||||||| ||||| || Sbjct 2443994 GAAGACGAAGGGTGTTACAAGTGCCTCTTCAATACCTTTGGTTCTGGGAAGATCTCAGGA 2443935 Query 171372 GTGGCCTGCCTCACCCTCT 171390 | |||||||||| |||| Sbjct 2443934 ATATCCTGCCTCACTCTCT 2443916 Score = 212 bits (234), Expect = 7e-50 Identities = 213/277 (77%), Gaps = 0/277 (0%) Strand=Plus/Minus Query 171393 GTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCACCTGT 171452 || |||||||| || || || || |||||| | | ||| |||||||| || ||||| || Sbjct 2441570 GTACAGCCCACAGTATTCCTTCACTATAAACTATCTGAAGACCACCTAAATATCACTTGC 2441511 Query 171453 TCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAATTGAA 171512 ||||||||||| ||||| | ||| ||| | |||||| | || |||||||| ||||| Sbjct 2441510 TCTGCCAATGCTCGCCCAGCCCCTATGATCTCCTGGAAGGTCTCTGGGTCAGAGATTGAG 2441451 Query 171513 AACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTACTCCAA 171572 ||||||| ||| || | || || | ||||| || || ||||| ||||| | ||||| Sbjct 2441450 AACAGTACTGAGATTGTCTCACACCCCAATGGGACAACGTCTGTCACCAGCATCCTCCAG 2441391 Query 171573 GTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACCTGGGA 171632 | |||||||||||||||||| |||| |||||||| |||||||| || ||||||||| Sbjct 2441390 ATCAAAGACCCCAAGAGTCAGGTGGGGAAGGAGGTGATCTGCCAGGTACTGCACCTGGGG 2441331 Query 171633 AATGTAACTAACTTAAGGGAAACTGTAAGCAAGGGTA 171669 | ||| || ||| ||||||||||| | ||| |||| Sbjct 2441330 ACTGTGACCGACTACAGGGAAACTGTGAACAAAGGTA 2441294 >seq58 Length=13669011 Score = 174 bits (192), Expect = 2e-38 Identities = 138/166 (83%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| ||||| || | ||| || | ||||||||||||||| | ||||||||| |||||||| Sbjct 13148018 CTTCAGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAA 13147959 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || |||||||||||||| || |||||||||||||||||||| || ||||| |||| Sbjct 13147958 GGGCACACCCAGGCCCATGTCTCCTGACCTCTGGTACAGCTGGCAGGACAGCTCACCGTT 13147899 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATG 147147 ||||||| |||||||| ||| |||||||| || || |||||| Sbjct 13147898 CACCACGTAGAACTGGCAAAGGGCATGGCACGGGGGTAGGGCCATG 13147853 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 147282 GGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTG 147341 ||||||||| ||||||||||| ||||| || ||||| || | || || |||| Sbjct 13144785 GGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTTCTGCTCTGGT 13144726 Query 147342 CGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC 147401 ||||| ||| | | | || || ||||||| | ||| |||||||| |||||| Sbjct 13144725 GGAGAATCCCAGGCTGTCCAAGAAGTCTCGGGACCCATTGGCATCCCAGATTTTCACTCC 13144666 Query 147402 CTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGA 147442 ||||| || |||||||||| || ||||| ||| ||| || Sbjct 13144665 CTTGGAAGACAGCTCCTTAGCGTTTGTGGATCCCTGGAAGA 13144625 >seq83 Length=9572586 Score = 159 bits (176), Expect = 4e-34 Identities = 228/316 (72%), Gaps = 4/316 (1%) Strand=Plus/Plus Query 146826 AAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCAAAATCTTGAGCTTGGG 146885 ||| ||||| ||| |||| || || || | ||| || | | || |||||||| || Sbjct 1005422 AAAGTCTTCAGCCTTGAAGTCATCGATTTTCTCAACTTTTCCAAGGATTTTGAGCTTTGG 1005481 Query 146886 GAAGGGTCGGGGGT-TCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGA 146944 ||| || | | | ||| | ||||| |||||||| |||| | ||| | ||||| | Sbjct 1005482 GAAAGGCCTTGATTCTCCCTGA-AGCTGCATTTTCAGCAGCTCAATGTGATCCAGGTAAA 1005540 Query 146945 CGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCA 147004 || || || |||| ||||| ||| |||| || ||||| ||||| || | ||| || | Sbjct 1005541 TATGTGCATCTCCCAAAGTGTGTACAGAGTCACCTGGCTTCAGGCCTGTGATGTGTGCGA 1005600 Query 147005 CCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCC 147064 ||||||||||||||| | |||||||| |||||||||| || | ||||||| ||| | Sbjct 1005601 TCATGTAGGTGAGCAGGGCATAGCTGGCGATGTTGAAGGACACACTCAGGCCCCCGTCTC 1005660 Query 147065 CCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAACTGGCACAGGA 147124 | |||||||||||||||| ||| || || || || |||||| || ||||| ||| Sbjct 1005661 CTGACCTCTGGTACAGCT-GCAGGACAG-TCATGGTTCATCACGTAGAAGTGGCAAAGGG 1005718 Query 147125 TGTGGCACGGCGGCAG 147140 |||||| | ||||| Sbjct 1005719 CATGGCACAGGGGCAG 1005734 >seq202 Length=4085823 Score = 140 bits (154), Expect = 4e-28 Identities = 543/840 (65%), Gaps = 54/840 (6%) Strand=Plus/Plus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 ||| || |||||||| | |||| || | ||||||| ||||| | | |||||| Sbjct 1199190 GTATTCCCTGGTGTTCACGGTTGGTCTGCTGGGCAATGTAGTGGTGGTGGTGATCCTCAC 1199249 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 ||| ||||| | |||| |||| ||||||||||||| |||| |||| |||||| || || Sbjct 1199250 AAAATACAACAAGCTCCGGATTATGACCAACATCTACCTGCTCAATCTGGCCATTTCCGA 1199309 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGGGAACTGGTGG 8789 | |||| | | ||||| || || || |||||||||| | ||| |||| || Sbjct 1199310 CTTGCTCTTCTTATTCACTCTGCCGTTCTGGATTCACT--ATGTTGGGTGGAA----TGA 1199363 Query 8790 GTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGTA 8849 ||||| | |||||| ||||||||||| | || || | || ||| |||| Sbjct 1199364 GTGGGTTTTTGGCCACCATATGTGTAAGTTGCTCTCTGGGCTCTATTACATGGGCTTGTA 1199423 Query 8850 CAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGTGTACGC 8909 ||| || || | || ||||| || |||| | ||| ||||||| || | ||| |||| Sbjct 1199424 CAGTGAGATCTTCTTCATCATACTCCTGACCATAGACCGGTATCTGGCCATCGTGCACGC 1199483 Query 8910 GGTGGCTTACAGGCTGGTCCGCGTGGTACCA--ATAGGCATCCTCGCCAGCCTCCTGGCC 8967 ||| | | | | ||| | |||| | || ||| || | ||| || | || Sbjct 1199484 CGTGTTTGCCCTTCGAGCCCGGACG--ACCACTTTTGGTATCATCACAAGCATCTTCACC 1199541 Query 8968 TGGATTCTGGCTGTGTTGGGAACCATGCCAGAGTTTATCTTTTATGAATCCAATAATGCC 9027 ||| | ||||| | ||| | | || | || || |||||||| |||| ||| | | | Sbjct 1199542 TGGGTCCTGGCAGGGTTAGCAGCCCTCCCTGAATTTATCTTCCATGAGTCCCAAGAGGAG 1199601 Query 9028 ACAGGCAAGGGGGTCTGCCAAGCCTCCT---ACACAGACT----------TTTGGAAGGG 9074 | || |||| || |||| | || ||| | |||||| | Sbjct 1199602 TTTGAACAGACTTTCTG-CAGTCCTCTTTACCCAAAGAATGGAGAGAATGCCTGGAAGTG 1199660 Query 9075 GGTTGATGTTACCAGCATGA----CCATGGTCACCCTCATCCTGCCTTTGCTTATCATGG 9130 | ||| | || ||| || |||| | || |||||| |||| || |||| Sbjct 1199661 CTTCCATGCTCTGAGGTTGAATATCCTGGGTCTCGCT----CTGCCTCTGCTCATTATGG 1199716 Query 9131 CCTTCTGCTACTGGAAAATCATCAAGGTCCTCCTCA-AGGCCCACAACAGGTCGAGAAAC 9189 || ||||||||| |||||| | || || | | |||| || || | ||| Sbjct 1199717 CCATCTGCTACTCAGGAATCATTAGAACACTGCTGAGATGCCC-CA----GTAAAAAAAA 1199771 Query 9190 CTGC-ACGCCGTCAAGCTCATTTTGATCATGGTGGTGCTTTATTTTGTCTTTTGGATCCC 9248 | | | ||| || ||||||||| |||| ||||| | | ||| | || |||| || Sbjct 1199772 ATACAAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTCTTTATTTTCTGGACACC 1199831 Query 9249 CTACAA---CGTCCTGCTCATTTTACACACCTACCAAGAGGCCATTTTTGGGCCAGACTG 9305 |||||| || | ||| | | | || | |||| | || | | | | || || Sbjct 1199832 CTACAATCTGGTTGTCCTCCTCTCA---ACTTTTCAAGTG--CA-CCTGGAGACTGAGTG 1199885 Query 9306 TGAAGCGCGGCGCAG---GGTGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCAC 9362 ||| || | |||| | ||||| ||||| | ||||| | ||| ||||||||| ||| Sbjct 1199886 TGA---GCAGAGCAGACAGCTGGACCTGGCCATGCTGGTGACGGAGGTGATCGCCTACAC 1199942 Query 9363 CCACTGCTGCGTCAACCCCGTCATCTACGCGTTTGTGGGCGAAAAGTTCCAACAGAACCT 9422 ||||||||| ||||||||||| |||||||| || || || || | ||||||| || |||| Sbjct 1199943 CCACTGCTGTGTCAACCCCGTGATCTACGCCTTCGTTGGTGAGAGGTTCCAAAAGCACCT 1200002 Score = 120 bits (132), Expect = 4e-22 Identities = 205/296 (69%), Gaps = 10/296 (3%) Strand=Plus/Minus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 |||||| |||| ||| | ||||| || || ||||| ||| ||| |||| |||||||| Sbjct 1128060 GTACTCGGTGGTATTTGTCTTTGGCCTGATAGGCAACATCCTAGTGGTCCTGGTCCTCAT 1128001 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 | ||||||||||||| | |||||| | ||||| ||| ||||||||||| | ||| Sbjct 1128000 GCAATACAAGAGGCTCAAAAGCATGACGAGCATCTACCTCCTCAACCTGGCCATGTCTGA 1127941 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCA-CTCGGGGGGAACT-GGT 8787 |||| | | | ||||| || ||||| |||||| ||| | | || || ||| ||| Sbjct 1127940 CCTGATCTTCCTCTTCACGCTGCCCTTCTGGATTGACTACAAGCTGAAGGATGACTGGGT 1127881 Query 8788 GGGTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTG 8847 ||| | | |||||||||||||| | || |||| | ||| || Sbjct 1127880 TTTTGGTA--------ATCACATGTGTAAGTTGCTCTCTGGGCTTTATTTCTTGGGCTTG 1127829 Query 8848 TACAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGT 8903 |||||||| || | || |||| |||| |||| | |||||||| || || |||| Sbjct 1127828 TACAGCGAGATCTTCTTCATCACCCTGCTGACCATCGACAGGTACCTGGCCATTGT 1127773 >seq166 Length=5848183 Score = 136 bits (150), Expect = 5e-27 Identities = 129/167 (77%), Gaps = 12/167 (7%) Strand=Plus/Plus Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290 |||||||| |||||||||| |||||||| |||||||| ||||||||| | |||||||||| Sbjct 2344236 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTTTACCTAGAGGAGGTGA 2344295 Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350 |||| |||| ||| | || ||||| |||| || ||||| || |||| Sbjct 2344296 TGCCGAAGGCTGAGGACCA------------TGGCCCCAACATCAAAGAGCACGTGAACT 2344343 Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397 | |||||||| ||||| |||||||| || |||||||| |||| ||| Sbjct 2344344 CCCTGGGGGAGAAGCTGAAGACCCTCAGGCTGAGGCTGAGGCGTTGT 2344390 Score = 113 bits (124), Expect = 5e-20 Identities = 77/87 (89%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521 |||| ||||| |||||||| |||||||| |||||||||||||| || || || ||||||| Sbjct 2346588 AGCTCCAAGAGAAGGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 2346647 Query 178522 TAGAAGCTTACATGACAACAAAAATGA 178548 ||||||| |||||||||||||| |||| Sbjct 2346648 TAGAAGCCTACATGACAACAAAGATGA 2346674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583475834275200