Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq53 111 1e-19 seq62 105 6e-18 seq33 104 2e-17 seq20 96.9 3e-15 seq259 89.7 5e-13 seq61 86.0 6e-12 seq34 86.0 6e-12 >seq53 Length=16102195 Score = 111 bits (122), Expect = 1e-19 Identities = 166/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 35501 TCTTTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTG 35560 || |||| |||||||| | |||||||| | ||| | || |||||||||||||||| Sbjct 15465267 TCCTTATCACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTG 15465326 Query 35561 TAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGG 35620 | || | ||| || || | || ||||||||||| || ||||| |||| | |||||| Sbjct 15465327 TGGTCAGACAAAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGG 15465386 Query 35621 TCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTC 35680 || | ||||| ||||||||| |||||| ||| | || | || || Sbjct 15465387 TCAGGAGGAATTACTTCCTTGTCCTGGATCTTGGCCTTTATGTTTTCTGTTGTATCCGAG 15465446 Query 35681 GATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | ||| ||||| | ||||| || || ||||||| || ||||| || |||||||| Sbjct 15465447 GGTTCGACCTCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 15465502 >seq62 Length=15298998 Score = 105 bits (116), Expect = 6e-18 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | ||||||||| | ||| | || |||||| ||||||||||| || | | Sbjct 5534027 CCACCACGAAGCCTCAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAC 5533968 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | |||||||| | |||| Sbjct 5533967 AACGTACGTCCATCTTCCAGGTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGA 5533908 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||| | || | || | || | ||| ||| Sbjct 5533907 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACGTTTTCTACTGCATCCGAGGGTTCGACC 5533848 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 || | ||||| || || ||||||| || |||| || |||||| Sbjct 5533847 TCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCAAGAAAGTCTGCA 5533802 >seq33 Length=16598743 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | || |||||||||||||||||| || | | Sbjct 8627182 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCAGAC 8627123 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | | ||| | ||||| || ||||| |||| | || ||||| | |||| Sbjct 8627122 AGAGTACGTCCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGA 8627063 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||| | | || | | || || | || ||| Sbjct 8627062 ATTCCTTCCTTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACC 8627003 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||||||| || ||||| ||||||||||| Sbjct 8627002 TCGAGAGTGATGGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCAT 8626956 >seq20 Length=22150888 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || |||||||| || || ||||| Sbjct 5019722 CTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAA 5019663 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || ||||| ||| |||||| ||||| | Sbjct 5019662 GATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 5019603 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 5019602 CTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 5019543 Query 35725 AAATATCTGCATTCTG 35740 || ||||||||| || Sbjct 5019542 GAAGATCTGCATTTTG 5019527 >seq259 Length=1197011 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/226 (69%), Gaps = 1/226 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | || | ||||||||||||||| || | Sbjct 605931 CCACCACGAAGTCTCAACACAATATGAAGAGTGGACCCCTTTTGAATGTTGTGGTCAAAC 605872 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | ||||||||| | | | Sbjct 605871 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGGGAA 605812 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||||||| |||||| ||| | | || | || || | ||| ||| Sbjct 605811 ATTCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACC 605752 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 || | ||||| || || || |||| || ||||| || ||||||| Sbjct 605751 TCGAGAGTGATGGTCTT-CCTGTCAGGGTCTTCACGAAAATCTGCA 605707 >seq61 Length=12256116 Score = 86.0 bits (94), Expect = 6e-12 Identities = 161/237 (68%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 35504 TTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAA 35563 ||| | ||| |||| | ||||||| | ||| || ||| |||||||||||||||||| Sbjct 4027216 TTAGTACCAGCACGAAGTCTCAACAGAAGATGAAAAGTAGACTCCTTTTGAATGTTGTAG 4027275 Query 35564 TCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCC 35623 || | ||| || || | || ||||| ||||| || ||||| | | | ||||||| Sbjct 4027276 TCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGGTTAGTCTTCGCTGGTCA 4027335 Query 35624 GAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGAT 35683 ||||||| ||||| || |||||| ||| | | || | | || || | | Sbjct 4027336 GAAGGAATTACTTCCTTATCTTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGT 4027395 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || ||||| | ||| | || || || ||| | |||| ||| |||||||| ||| Sbjct 4027396 TCGACCTCGAGAGTGGTGGTCTTCCCTGTCCGGATCTTCATAAAAATCTGCATCCTG 4027452 >seq34 Length=14701056 Score = 86.0 bits (94), Expect = 6e-12 Identities = 129/182 (71%), Gaps = 1/182 (1%) Strand=Plus/Minus Query 35555 ATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGC 35614 ||||||||||| | | || | |||| |||||||| || || ||||| || | || | Sbjct 8730363 ATGTTGTAATCAGAAAGAGTGTGGCCGTCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTC 8730304 Query 35615 TGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTG 35674 |||||||| | || | || || ||| ||| |||||| ||||| | | | ||| Sbjct 8730303 TGCTGGTCAGGGGGGATGC-CTTCTTATCCTGGATCTTGGCCTTCATGTTCTCGATGGTG 8730245 Query 35675 TCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGC 35734 || || || |||||||||| |||| || || || |||| || ||||| || |||||| Sbjct 8730244 TCACTGGACTCCACCTCCAGGGTGACAGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGC 8730185 Query 35735 AT 35736 || Sbjct 8730184 AT 8730183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450784200953440