Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq84 114 1e-20 seq53 93.3 4e-14 seq62 89.7 5e-13 seq27 89.7 5e-13 seq20 84.2 2e-11 >seq84 Length=11797838 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||||||| || | || ||||| || ||||| || || || ||||||||||| Sbjct 5419764 CCACCTCTGAGGCGAAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 5419705 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || |||||||| || ||||| |||| | |||||| || || || Sbjct 5419704 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 5419645 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| ||||||||||| || || ||||| || | ||||| | ||||| Sbjct 5419644 ATGCCCTCTTTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 5419585 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || ||||| ||||| || || || || ||||| || |||||| Sbjct 5419584 TCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCATT 5419537 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| || | |||| || ||||| || |||||||| || || ||||||||||| Sbjct 5420822 CCTCCCCTTAAGCGCAGGACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGAC 5420763 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || |||||||| || ||||| ||||| | |||||| || || || Sbjct 5420762 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGG 5420703 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| || | ||||| | ||||| Sbjct 5420702 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 5420643 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || || || || || || ||||| || ||||| Sbjct 5420642 TCCAAGGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 5420596 >seq53 Length=16102195 Score = 93.3 bits (102), Expect = 4e-14 Identities = 156/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| |||||| || || || ||||| |||||||||||||||| ||| | ||| || | Sbjct 15465285 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTGGTCAGACAA-AGTACG 15465343 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || ||||| ||||| ||||| |||| | ||||| || || || || |||| Sbjct 15465344 TCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTACTTC 15465403 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || | || ||| || || | ||| || |||||||| Sbjct 15465404 CTTGTCCTGGATCTTGGCCTTTATGTTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGT 15465463 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || | || || |||||||| ||||| ||| Sbjct 15465464 GATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATTG 15465506 >seq62 Length=15298998 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 134501 CAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGT 134559 |||||| || || || ||||| ||||| |||||||||||||| | ||||| | | | Sbjct 5534013 CAACACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAACG-TACGTCCAT 5533955 Query 134560 CGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTT 134619 | || || || ||||||||||| |||| | ||||| || || || || ||||| || | Sbjct 5533954 CTTCCAGGTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGT 5533895 Query 134620 CTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGG 134679 | || || || || || || | || || || | ||| || |||||||| |||| Sbjct 5533894 CCTGGATCTTGGCCTTTACGTTTTCTACTGCATCCGAGGGTTCGACCTCGAGAGTGATGG 5533835 Query 134680 TTTTACCGGTTAAAGTTTTAACGAAAATTTGCA 134712 | || || || | || || | |||| | |||| Sbjct 5533834 TCTTCCCCGTCAGGGTCTTCAAGAAAGTCTGCA 5533802 >seq27 Length=17078927 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 134518 TGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 |||| |||||||||||||||||||| | ||| || || || || || || ||||| Sbjct 16539939 TGGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTATGGCCATCCTCCAGTTGCTTGCCA 16539997 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 ||||| |||| | ||||| || || || || |||||||| ||||| || || || Sbjct 16539998 GCAAAGATCAGTCTTTGCTGGTCAGGAGGGATTCCTTCTTTATCTTGGATCTTGGCCTTT 16540057 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || || | ||| || || | ||| || | |||||| ||||| || || || | || Sbjct 16540058 ACATTTTCTATTGTATCTGAAGGTTCAACCTTGAGAGTGATGGTCTTCCCTGTCAGGGTC 16540117 Query 134697 TTAACGAAAATTTGCATTTTG 134717 || |||||| ||||| ||| Sbjct 16540118 TTCCTGAAAATCTGCATCTTG 16540138 >seq20 Length=22150888 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || || || || | || ||||| || || || || || || |||||||| || Sbjct 5019757 CCACCCCTCAGACGAAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAG 5019698 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||||||||||||||| || | | |||||| || || || Sbjct 5019697 AGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 5019638 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || || || || | ||||| | ||||| Sbjct 5019637 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACC 5019578 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || ||||| || ||||| | || || ||||| || ||||||||| Sbjct 5019577 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTTG 5019527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505387862443360