Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_027016.1 Length=226084 Score E Sequences producing significant alignments: (Bits) Value seq70 109 8e-19 >seq70 Length=10430177 Score = 109 bits (120), Expect = 8e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 213996 AGATTATTGACGGGGAAGTCTACCCTCCTACCGTCAAGGAGGCCCGAGTGCATATGGTTT 214055 |||| |||| || ||| | || ||||| || ||||| || | | || | ||| | | Sbjct 4187033 AGATAATTGGTGGTGAAATGTATCCTCCCACAGTCAAAGATACTCAGGTCGAGATGATCT 4186974 Query 214056 ACGAACCCAGCGTTCCCGAAAAGTTACGTTTCGCACTGGGTAACGAGATGTTTGGACTCG 214115 || || ||||| ||| | | || || || |||| | || | || || || | Sbjct 4186973 ACCCCCCTCATGTTCCTGAACACCTGCGGTTTGCTGTGGGGCAGGAAGTCTTCGGTCTGG 4186914 Query 214116 TGCCCGGTTTCATGGTGTACGCCATTATCTGGCTGAGAGAGCACAACAGGGTTTGCGACG 214175 |||| ||| | ||| |||| |||| ||||||||| | || |||||||| || || || | Sbjct 4186913 TGCCTGGTCTGATGATGTATGCCACAATCTGGCTGCGGGAACACAACAGAGTGTGTGATG 4186854 Query 214176 TGCTGAAACAAGAGCACCCGGAATGGAACGACGAACAGCTGTTCCAGA 214223 | || ||||| ||||| || |||||| |||| || ||||||||||||| Sbjct 4186853 TTCTTAAACATGAGCATCCAGAATGGGACGATGAGCAGCTGTTCCAGA 4186806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723325718344320