Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq66 89.7 6e-13 >seq66 Length=17242564 Score = 89.7 bits (98), Expect = 6e-13 Identities = 101/133 (76%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 59980 AACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCT 60038 ||||| | |||| ||||| ||| ||||||||||||||||| ||||| || || | Sbjct 10224049 AACGTGTTGTAGCCTTTGC-TGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCG 10223991 Query 60039 ATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATT 60098 || |||||||||||||| || || || ||||| ||||| | || ||||| || || ||| Sbjct 10223990 ATATTCTGGCTCAAAAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATT 10223931 Query 60099 TCCCGGGACGAGG 60111 | | ||||||| Sbjct 10223930 AGCAGAGACGAGG 10223918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548513363257920