Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq80 123 3e-23 >seq80 Length=10124391 Score = 123 bits (136), Expect = 3e-23 Identities = 194/274 (71%), Gaps = 8/274 (3%) Strand=Plus/Minus Query 14277 GACACGTACAGCCCCGACGAGCACCTGTGGGCCACCGTGCAGAGAATGTACGGGACGCCC 14336 ||||| |||||||| |||||| | || |||||||| | ||||| || || | ||| Sbjct 479642 GACACATACAGCCCGGACGAGTATCTCTGGGCCACTATTCAGAGGATCCCCGA-AGTCCC 479584 Query 14337 GGGGGGATCCCCGTTC--ACGTCA--AGTACGACACCTCGGACATGTGGGCCAAGGTCAG 14392 ||| || | || | | | || ||||||| | || |||||| || | | ||| Sbjct 479583 AGGG---TCACTGTCCTTAAGCCATAAGTACGATATGTCCGACATGCAAGCAATTGCCAG 479527 Query 14393 GTTCGTCAAGTGGCACTACTACGAGGGGGATATCAAGAAAGGGGCCCTGTACCCGCCTTG 14452 ||| ||||||||||| |||| || || || || || || |||| |||||||| || Sbjct 479526 GTTTGTCAAGTGGCAGTACTTTGAAGGTGACATTTCCAAGGGCGCCCCCTACCCGCCGTG 479467 Query 14453 CGACGGCATCCACGTCCACGCCATCTGCATCTTCGGGTCCGGCGACGTGAAGTGGCTGAA 14512 | |||| ||||||| | | || | ||| | ||||| | || ||| |||| ||| || Sbjct 479466 CAGCGGCGTCCACGTGCGCTCCGTGTGCGTTTTCGGAGCGGGTGACTTGAACTGGATGCT 479407 Query 14513 GAGCGTCCCGCACCTGTTCGCCAACAAGTTCGAC 14546 | |||| | ||| |||||||||||||||||||| Sbjct 479406 GCGCGTGCACCACTTGTTCGCCAACAAGTTCGAC 479373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658725465287680