Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq53 100 2e-16 seq259 98.7 7e-16 seq62 96.9 2e-15 seq20 95.1 8e-15 seq33 91.5 1e-13 seq34 87.8 1e-12 seq265 86.0 4e-12 seq84 82.4 5e-11 >seq53 Length=16102195 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||| ||||| || || ||||||||||| || || || Sbjct 15465505 AATATGCAGATTTTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCC 15465446 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || |||| |||| || || ||||| |||| | || || || Sbjct 15465445 TCGGATACAACAGAAAACATAAAGGCCAAGATCCAGGACAAGGAAGTAATTCCTCCTGAC 15465386 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| || |||||||| | ||| ||||| || || Sbjct 15465385 CAGCAAAGACTGATCTTTGCTGGCAAGCAGCTGGAAGATGGACGTACTTTGTCTGACCAC 15465326 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| ||||| |||||||| | ||| | || || || Sbjct 15465325 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 15465288 >seq259 Length=1197011 Score = 98.7 bits (108), Expect = 7e-16 Identities = 151/214 (71%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671 ||||||||||||| || ||||| || |||| | | ||||||||||| ||||| || ||| Sbjct 605707 TGCAGATTTTCGTGAAGACCCTGACAGGAAGACC-ATCACTCTCGAGGTTGAACCCTCGG 605765 Query 23672 ACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAAC 23731 | || |||| |||| || || ||||| ||||| | | || || || | Sbjct 605766 ATACAAAAGAAAATGTAAAGGCTAAGATCCAGGACAAGGAAGGAATTTCCCCTGACCAGC 605825 Query 23732 AGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACA 23791 || | | || ||||| ||||| ||||||||||| | ||| ||||| || |||||| Sbjct 605826 AGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTTTGACCACAACA 605885 Query 23792 TACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 | ||||| | |||||| | ||| | || || || Sbjct 605886 TTCAAAAGGGGTCCACTCTTCATATTGTGTTGAG 605919 >seq62 Length=15298998 Score = 96.9 bits (106), Expect = 2e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671 |||||| |||| | || ||||| ||||| || || ||||||||||| || || || ||| Sbjct 5533802 TGCAGACTTTCTTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCGAACCCTCGG 5533861 Query 23672 ACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAAC 23731 | | || |||| |||| || || ||||| ||||| | || || || || | Sbjct 5533862 ATGCAGTAGAAAACGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGACCAGC 5533921 Query 23732 AGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACA 23791 | | | || ||||| ||||| || |||||||| | ||| || || || ||||||| Sbjct 5533922 AAAGACTGATCTTTGCAGGCAAGCACCTGGAAGATGGACGTACGTTGTCTGACTACAACA 5533981 Query 23792 TACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 | || || |||||||| | ||| | || || ||| | || || || Sbjct 5533982 TTCAGAAGGAGTCCACTCTTCATCTTGTGTTGAGGCTTCGTGGTGG 5534027 >seq20 Length=22150888 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||| || ||||| || || || || ||||| || || || || || Sbjct 5019528 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 5019587 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | ||||| | || | | || || || || || ||||| | || ||||| Sbjct 5019588 AGTGACACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCCCCAGAC 5019647 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || ||| | | || ||||| |||||||| |||||||| | |||||| | |||||| Sbjct 5019648 CAGCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGATGGCCGCACTCTCTCTGATTAC 5019707 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || |||||||| || Sbjct 5019708 AACATCCAGAAAGAGTCGAC 5019727 >seq33 Length=16598743 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||| ||||| || ||||| ||||| || || ||||||||||| || | || Sbjct 8626953 AATATGCAGATATTCGTGAAGACCCTGACGGGGAAGACCATCACTCTCGAGGTCAAACCC 8627012 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || | |||| |||| || || ||||| ||||| | || || || Sbjct 8627013 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGACAAGGAAGGAATTCCTCCTGAC 8627072 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| |||| |||| | | ||| ||| | || ||| Sbjct 8627073 CACCAAAGACTGATCTTTGCTGGCAAGCAACGGGAAAATGGACGTACTCTGTCTGACTAC 8627132 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825 ||||| ||||| ||| |||| | ||| | || || || Sbjct 8627133 AACATTCAAAAGGAGCCCACTCTTCATCTTGTGTTGAG 8627170 >seq34 Length=14701056 Score = 87.8 bits (96), Expect = 1e-12 Identities = 140/199 (70%), Gaps = 3/199 (2%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || ||||| || || || || |||| || || || || |||| Sbjct 8730183 ATGCAGATCTTCGTGAAGACCCTGACTGGCAAGACTGTCACCCTGGAGGTGGAGTCCAGT 8730242 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || || || | || | | | | ||||||| | || || || || Sbjct 8730243 GACACCATCGAGAACATGAAGGCCAAGA--TCCAGGATAAGAAGGCATCCCCCCTGACCA 8730300 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| |||||||| |||||||||| | |||| | |||||||| Sbjct 8730301 GCAGAGGCTCATCTTTGCAGGCAAACAGCTGGAAGACGGCCACACTCTTTCTGATTACAA 8730360 Query 23790 CATACAAAAAGAGTCCACA 23808 ||| | |||||||| ||| Sbjct 8730361 CATCTAGAAAGAGTCGACA 8730379 >seq265 Length=2252016 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||||||||| || || ||||| ||||| || || |||||||||| || || || Sbjct 744293 AATATGCAGATTTTTGTGAAGACCCTGACGGGGAAGACCGTCACTCTCGAGGTCGAACCC 744352 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 |||| || |||| |||| || || ||||| ||||| | || || || Sbjct 744353 TCGGATACGACAGAAAATGTAAAGGTCAAGATCCAGGACAAGGAAGGAATTCCTCCTGAC 744412 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 || || | | || ||||| ||||| ||||||||||| | | | |||| || || Sbjct 744413 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTT----GGACCAC 744468 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 |||| ||| | |||||||| | ||| | || || || || || || || Sbjct 744469 AACACTCAAGAGGAGTCCACTCTTCATCTTGTGTTGAGATTCCGTGGTGG 744518 >seq84 Length=11797838 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || ||| | || || || || ||||| || || || || ||| Sbjct 5419537 AATGCAGATCTTCGTGAAGACCTTGACTGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 5419596 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || | | || || || || ||||| || | || ||||| || Sbjct 5419597 TGACACCATCGAGAACGTCAAGGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCAGACCA 5419656 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || |||||||| ||||| |||||||| | ||||| | || ||||| Sbjct 5419657 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 5419716 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || ||||||||||| Sbjct 5419717 CATCCAGAAAGAGTCCAC 5419734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338002728687344