Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq82 185 7e-42 seq4 132 4e-26 seq133 127 2e-24 seq30 118 9e-22 seq74 109 5e-19 seq66 104 2e-17 seq71 93.3 4e-14 >seq82 Length=8814989 Score = 185 bits (204), Expect = 7e-42 Identities = 568/870 (65%), Gaps = 40/870 (5%) Strand=Plus/Plus Query 4271 TACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAA 4330 || || ||| || ||||| ||||| || ||||| | |||||| |||||||| ||||| Sbjct 1281057 TAGTCTCTTCTCAAAGAAGTTAGTCTTCCCTTC-AGTGAAATAGCCTCCATAAAGTCAAA 1281115 Query 4331 CGGATTAGTTGCGTTGTAATGTTTT-TCACACTTTAGAGCTACA--AGCAATCGGTCAGC 4387 ||||| | | || || || | | || |||| || | | || ||| || Sbjct 1281116 TGGATTTTCTACTCTGAAAACCTTGCTAAAACCC---AGCTCCAGCATAAGTCTGTCTGC 1281172 Query 4388 TACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACAGGTAG 4447 || ||||| | ||||| |||| | |||| || || || || | ||| | || Sbjct 1281173 CACGAATTCGACGTACTGCTTCATCAAAGCGCAATTCATCCCGATGAGCTCCACTGTCAG 1281232 Query 4448 CGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGT-GATTATATCTTTTATTT 4506 || | || | ||||| |||||| | | | || ||| |||||| ||||| | | Sbjct 1281233 GGCCTCCGTGAGGAACTCGTGTTCTGTCCTAGCTGCA-CTGACGATTATTTCTTTGACTC 1281291 Query 4507 TATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCA 4566 | | | || |||| | || | || | |||| | || ||||| ||||| || | Sbjct 1281292 TCTGCTCCGAACGTTTGTGTAGCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTA 1281351 Query 4567 AACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCT 4626 |||| |||||||||||||| ||||| || ||||| || | |||| ||| | |||| | Sbjct 1281352 AACCCTCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCGGACATGAGTCCTCGTT 1281411 Query 4627 TTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAA 4686 | || ||||| |||| || ||||| || ||||||||||| || ||||| | ||||||| Sbjct 1281412 TCTTGAGCCACAATACAGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCGCTGCGGCAA 1281471 Query 4687 ACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAG 4745 | ||||| | || ||| ||| ||| ||||||||| |||| || ||||| Sbjct 1281472 AGGCTACGACACGTTCTCCGTACGTAGC-CTCTTTGTCTTCGATCCGGCGCAAGGCCCAA 1281530 Query 4746 TTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA---TAATTTACTTTTT 4802 | || ||||| || | || | ||| | | || || || |||| |||| | Sbjct 1281531 TCTGCCGCCTTCTTTACAGAAGGCACTGTCTCACTGGCATTGAAGAGGAATTCCCTTTCT 1281590 Query 4803 TCAAATGG-GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATT 4861 | ||| |||| ||| |||||||| || || || || | ||||||||||||||| || Sbjct 1281591 T----TGGAATCTTTAATGTAAGTGTCAATGAGGAGACTGTCCATTTCAGAATGTATGTT 1281646 Query 4862 TTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACA 4921 ||| | ||||| || || || || || | | ||||| || Sbjct 1281647 TTCCACGGCAATTTGGAAGCCATAGAAATAACGGGCTTCCGT------------------ 1281688 Query 4922 AAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAAC 4981 |||| | || |||||||| |||||||| | ||||| |||||| | || |||| ||| Sbjct 1281689 -AATC--TGAACCAAGTTTTCATTTACTATGCTATCACTTGCTGCAGAGAAAGCCAGAAC 1281745 Query 4982 ATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGT 5041 | || | || | || |||||||| || || |||| | | | || || | Sbjct 1281746 ACACGAAGTGAAACATCTCTCTTCAGGCTTCAGGGCTTCCCAGGGCTGAATGTCCTTGGA 1281805 Query 5042 TAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAAT 5101 | || | || ||| | ||||| || || || |||||||| || ||||| ||||| Sbjct 1281806 AAGGTCCAGCTCCTCAGCTGTCCAGAAGGAAGCCTCCGCTTTCTTATACATCTGCCAAAC 1281865 Query 5102 ATCAGGATACTGAATCGGAAGTATGACAAA 5131 |||| | || | || |||| |||||||| Sbjct 1281866 ATCACGGTATTCGATAGGAAAGATGACAAA 1281895 >seq4 Length=32345528 Score = 132 bits (146), Expect = 4e-26 Identities = 276/407 (68%), Gaps = 7/407 (2%) Strand=Plus/Minus Query 31667 CTATCTGAACATGCTACGGTTCCTACAAAAGGATCAGAGGGTTCTGCGGGATATGATTTA 31726 || || || || || || | ||| || || || || ||| | | |||| ||||| || Sbjct 14664804 CTTTCGGAGCACGCCACCGCTCCGACCAAGGGGTCTGAGCGCGCCACGGGCTATGACCTA 14664745 Query 31727 TATAGCGCCTACGACTATGTGGTAGAGGCAAAATCTAGAGCGCTAGTTAAAACCGATATT 31786 || || ||||| || || ||| | | | ||| || || |||| || ||| Sbjct 14664744 TACAGTGCCTATGATTACACAGTACCACCTATGGAGAAAGCCCTTGTGAAAAGAGACATT 14664685 Query 31787 CAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGATCTGGATTGGCAGTT 31846 || || || | ||||| |||||||| || || ||||||| | ||||| ||||| | Sbjct 14664684 CAGATAGCTCTTCCTTCTGGGTGCTATGGGAGAGTAGCTCCACGTTCTGGCTTGGCTGCA 14664625 Query 31847 AAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTATAGAGGAAACGTTGGA 31906 |||||||| || || ||||| || ||||| |||||| ||| ||||||||||| |||| Sbjct 14664624 AAACACTTCATAGATGTGGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAATGTTGTT 14664565 Query 31907 ATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAGTATAAAAAAGGGCGATAGGGTA 31963 |||| ||||||||||||| |||||| | | || | |||||||| ||| | | Sbjct 14664564 GTTGTACTGTTTAATTTTGGCAAAGAAAAGTTCGA-AG--TCAAAAAGGGTGATCGAATT 14664508 Query 31964 GCTCAACTAATTTGCGAAAAAATAGAAATGCCCCAAATAGAAGTAGCTAATTATCTAGAT 32023 || || || ||||| ||| ||| || ||||||| | || | | | ||||| Sbjct 14664507 GCACAGCTCATTTGTGAACGGATATTTTACCCAGAAATAGAGGAAGTTCAAGTTTTAGAT 14664448 Query 32024 TGCACGAAAAGAGGCGCTAAAGGCTTTGGATCTACCGGAAATTAATT 32070 ||| |||| || | ||| ||||| || || ||||| ||||| Sbjct 14664447 GACACTGAAAGGGGTTCAGGAGGTTTTGGTTCCACTGGAAA-TAATT 14664402 >seq133 Length=6119822 Score = 127 bits (140), Expect = 2e-24 Identities = 275/407 (68%), Gaps = 7/407 (2%) Strand=Plus/Plus Query 31667 CTATCTGAACATGCTACGGTTCCTACAAAAGGATCAGAGGGTTCTGCGGGATATGATTTA 31726 || || || || || || | ||| || || || || ||| | | ||||| ||||| || Sbjct 1720387 CTTTCGGAGCACGCCACCGCTCCGACCAAGGGGTCCGAGCGCGCCGCGGGCTATGACCTA 1720446 Query 31727 TATAGCGCCTACGACTATGTGGTAGAGGCAAAATCTAGAGCGCTAGTTAAAACCGATATT 31786 || || |||| || || ||| | | | ||| || || ||||| || ||| Sbjct 1720447 TACAGTGCCTGTGAATACACAGTACCACCTATGGAGAAAGCTCTTGTGAAAACAGACATT 1720506 Query 31787 CAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGATCTGGATTGGCAGTT 31846 || || || | ||| |||||||| || || ||||||| | ||||| ||||| | Sbjct 1720507 CAGATCGCTCTTCCTAATGGGTGCTATGGGAGAGTAGCTCCACGTTCTGGCTTGGCTGCA 1720566 Query 31847 AAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTATAGAGGAAACGTTGGA 31906 |||||||| || || || || || ||||| |||||| ||| ||||||||||| ||||| Sbjct 1720567 AAACACTTCATAGATGTAGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAATGTTGGT 1720626 Query 31907 ATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAGTATAAAAAAGGGCGATAGGGTA 31963 |||| ||||||||||||| |||||| | | || | |||||||| ||| | | Sbjct 1720627 GTTGTACTGTTTAATTTTGGCAAAGAAAAGTTCGA-AG--TCAAAAAGGGTGATGGAATT 1720683 Query 31964 GCTCAACTAATTTGCGAAAAAATAGAAATGCCCCAAATAGAAGTAGCTAATTATCTAGAT 32023 || || || ||||| ||| ||| || ||||||| | || | | | ||||| Sbjct 1720684 GCACAGCTCATTTGTGAACGTATATTTTACCCAGAAATAGAGGAAGTTCAAGTTTTAGAT 1720743 Query 32024 TGCACGAAAAGAGGCGCTAAAGGCTTTGGATCTACCGGAAATTAATT 32070 ||| |||| | | ||| |||||||| || ||||| ||||| Sbjct 1720744 GACACTGAAAGGGATTCAGGAGGTTTTGGATCCACTGGAAA-TAATT 1720789 >seq30 Length=16613269 Score = 118 bits (130), Expect = 9e-22 Identities = 208/299 (70%), Gaps = 7/299 (2%) Strand=Plus/Plus Query 31775 AAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGATCT 31834 || ||| | ||||| || || | ||||| |||| ||| || || ||||| | | ||| Sbjct 1726643 AAGACCAACATTCAGATAGCTCTTCCTTCTGGGTACTATGGGAGAGTAGCTGCACGTTCT 1726702 Query 31835 GGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTATAGA 31894 || ||||| | |||||||| || || || || || |||| |||||| ||| |||||| Sbjct 1726703 GGCTTGGCTGCAAAACACTTCATAGATGTAGGAGCCAGTGTCATAGATGAAGATTATAGA 1726762 Query 31895 GGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAGTATAAAAAAG 31951 ||||||||||| ||||| ||||||||||||| |||||| | | || | |||||| Sbjct 1726763 GGAAACGTTGGTATTGTACTGTTTAATTTTGGCAAAGAAAAGT-TTGAAG--TCAAAAAG 1726819 Query 31952 GGCGATAGGGTAGCTCAACTAATTTGCGAAAAAATAGAAATGCCCCAAATAGAAGTAGCT 32011 | ||| | | || || || ||||| ||| | ||| || ||||||| | || | Sbjct 1726820 TGTGATCGAATTGCACATCTCATTTGTGAACACATATTTTACCCAGAAATAGAGGAAGTT 1726879 Query 32012 AATTATCTAGATTGCACGAAAAGAGGCGCTAAAGGCTTTGGATCTACCGGAAATTAATT 32070 | | ||||| ||| |||| || | ||| |||| || || ||||| ||||| Sbjct 1726880 CAAGTTTTAGATGACACTGAAAGGGGTTCAGGAGGTTTTGCTTCCACTGGAAA-TAATT 1726937 >seq74 Length=11690531 Score = 109 bits (120), Expect = 5e-19 Identities = 151/210 (72%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 31772 GTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGA 31831 || |||||||| ||||| || || | ||||| |||||||| || || ||||||| Sbjct 9996103 GTGAAAACCGACATTCAGATAGCTCTTCCTTCTGGGTGCTATGGGAGACTAGCTCCACAT 9996044 Query 31832 TCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTAT 31891 ||||| ||||| | ||| |||| || || || || || ||||| |||| | ||| || Sbjct 9996043 TCTGGTTTGGCTGCAAAATACTTCATAGATGTAGGGGCTGGTGTCATAGCTGAAGATTAC 9995984 Query 31892 AGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGGAGAAAAATCATACAGTATAAAAAAG 31951 |||||||| ||||| || | |||||||||||| | ||| || || | |||||| Sbjct 9995983 AGAGGAAATGTTGGTGTTCTACTGTTTAATTTTG--GCAAAGTC---CAAAGTCAAAAAG 9995929 Query 31952 GGCGATAGGGTAGCTCAACTAATTTGCGAA 31981 || ||| | | || || || ||||| ||| Sbjct 9995928 GGTGATGGAATTGCACAGCTCATTTGTGAA 9995899 >seq66 Length=17242564 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 |||||||||||||| ||||| || ||||| || | || ||||| | |||| ||||| Sbjct 10223920 TCGTCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTTTTG 10223979 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| ||||| | ||||| || ||||||||||| || ||||| || || ||||| ||| Sbjct 10223980 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAGGCT 10224039 Query 4692 AC 4693 || Sbjct 10224040 AC 10224041 Score = 89.7 bits (98), Expect = 4e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871 |||| ||| |||||||| || || || |||||||||||||||||||| ||||| || ||| Sbjct 10225903 TCTTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCA 10225962 Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915 || || || || || || || | ||||| || | |||||||| Sbjct 10225963 ATTTGGAAGCCATAGAAACAACGGGCTTCCGTAATCTGAACTTC 10226006 >seq71 Length=10149521 Score = 93.3 bits (102), Expect = 4e-14 Identities = 99/130 (76%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980 |||||||| || || ||||| || || || || ||||||||||||||||| || || | Sbjct 1777939 AAAATCTT---ACCAAATTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCTAAGA 1777883 Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040 ||||| ||||| |||| || || | ||||| || |||||||| || | ||| || | Sbjct 1777882 TGTGAGAGATAAAATACTTCTCTTCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTG 1777823 Query 5041 TTAAATCAAC 5050 ||||||||| Sbjct 1777822 ATAAATCAAC 1777813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427040918615444