Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq84 136 9e-27 seq20 132 1e-25 seq34 104 5e-17 seq53 102 2e-16 seq8 102 2e-16 seq259 100 7e-16 seq62 100 7e-16 seq33 96.9 8e-15 seq10 95.1 3e-14 seq24 93.3 1e-13 seq265 84.2 5e-11 >seq84 Length=11797838 Score = 136 bits (150), Expect = 9e-27 Identities = 166/225 (74%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 ||||| | ||||| || || ||||| |||||||| ||||||||||| || | | || Sbjct 5419758 CTGAGGCGAAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTG 5419699 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | ||||||||| || ||||||||| ||||| |||||||||||||| | | ||| || Sbjct 5419698 CGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCC 5419639 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060 || |||||||| || || ||||| |||| | | |||| ||| ||| || || Sbjct 5419638 TCTTTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 5419582 Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || || || || | ||||||||||||| ||||||| Sbjct 5419581 AGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCATT 5419537 Score = 123 bits (136), Expect = 6e-23 Identities = 158/214 (74%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || ||||| || ||||| ||||||||||| || | | || | ||||||| Sbjct 5420807 AGGACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 5420748 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||||||||| ||||| | |||||||||||| | | ||| || ||||| || Sbjct 5420747 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 5420688 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATAG 152070 || || || |||||| |||| | | |||| || ||| | || |||| || || | Sbjct 5420687 TGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTC-CACCTCCAAG-GTGATGG 5420630 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || | ||||||||||||| |||||| Sbjct 5420629 TCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 5420596 Score = 109 bits (120), Expect = 1e-18 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | |||||| || || || || |||||||| |||||||||||||| | | ||| Sbjct 5420589 CCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 5420530 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || ||||||||| ||||| |||||||||||||| | | ||| || Sbjct 5420529 GCGGCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCC 5420470 Query 152003 TTCCTTTTCTTGAATTTT 152020 |||||| || || || || Sbjct 5420469 TTCCTTATCCTGGATCTT 5420452 >seq20 Length=22150888 Score = 132 bits (146), Expect = 1e-25 Identities = 161/218 (74%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || |||||||| |||||||||||||| | | ||| | |||||| Sbjct 5019742 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAGAGAGTGCGGCCATCT 5019683 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| || || ||||| |||||||||||||| | | ||| |||||||| || Sbjct 5019682 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCTTCCTTATCC 5019623 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || || |||| | | |||| ||| ||| || || || || || Sbjct 5019622 TGGATCTTGGCCTTCACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 5019566 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || || ||||||||||||| ||||||||| Sbjct 5019565 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTT 5019528 >seq34 Length=14701056 Score = 104 bits (114), Expect = 5e-17 Identities = 154/215 (72%), Gaps = 5/215 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || || || |||||||| | |||||||||||| | | ||| || || Sbjct 8730394 GAGGACCAGGTGCAGTGTCGACTCTTTCTAGATGTTGTAATCAGAAAGAGTGTGGCCGTC 8730335 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || ||| || || ||||| |||||||||||||| | | ||| |||| ||| || Sbjct 8730334 TTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTT-CTTATC 8730276 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATA 152069 || || || || | |||| | | ||| ||| | ||| || || || || | | Sbjct 8730275 CTGGATCTTGGCCTTCATGTTCTCGATGGTGTCACTGGA--CTCCACCTCCAGGGTGACA 8730218 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 8730217 GTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 8730183 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| || || || ||||||||||| |||||||||||||| | | ||| | ||||| Sbjct 8730167 GAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCAGCCATC 8730108 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTC 151990 ||| || ||| || || ||||| |||||||||| ||| Sbjct 8730107 TTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTTGTC 8730069 >seq53 Length=16102195 Score = 102 bits (112), Expect = 2e-16 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||| ||||| ||||| ||||||| || | ||||| | Sbjct 15465285 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTGGTCAGACAAAGTACGT 15465344 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| || || |||||||| | | ||| ||||| Sbjct 15465345 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTACTTCC 15465404 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || | | ||| | || || || || || ||||| Sbjct 15465405 TTGTCCTGGATCTTGGCCTTTATGTTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGTG 15465464 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| || ||||||||||| | |||||| || Sbjct 15465465 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCATATT 15465505 >seq8 Length=29698465 Score = 102 bits (112), Expect = 2e-16 Identities = 158/222 (71%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | |||||| | || || || |||||||| |||||||||||||| | | ||| Sbjct 12480145 CCTCAGACAGAGGACCACGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 12480204 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| | ||| || || |||| |||||||||| ||| || | ||| || Sbjct 12480205 GCGGCCATCTTCCATCTGTTTGCCTGCAAAGAGGAGCCTCTGCTTGTCAGCAG-GATGCC 12480263 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062 ||| || || || || || | ||| |||| | ||| ||| ||| || || || Sbjct 12480264 TTCTTTATCCTGGATCTTGGCCTGCACATTCTC-AGGCTCGCTG--GGCTCCACCTCCAG 12480320 Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||| || || ||||||||||||| |||||| Sbjct 12480321 GGTGATGGTCTTGCAGGTCAGGGTCTTCACGAAGATCTGCAT 12480362 >seq259 Length=1197011 Score = 100 bits (110), Expect = 7e-16 Identities = 153/217 (71%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||| ||||||||| ||| | ||||| ||||||| || ||||| | Sbjct 605922 AGTCTCAACACAATATGAAGAGTGGACCCCTTTTGAATGTTGTGGTCAAACAAAGTACGT 605863 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| || ||||||||||| | || ||||||||| Sbjct 605862 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGGGAAATTCCTTCC 605803 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || ||| | ||| | || || || || || ||||| Sbjct 605802 TTGTCCTGGATCTTAGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTCGAGAGTG 605743 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCA 152103 || || || || || || ||||||||||| | ||||| Sbjct 605742 ATGGTCTT-CCTGTCAGGGTCTTCACGAAAATCTGCA 605707 >seq62 Length=15298998 Score = 100 bits (110), Expect = 7e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 |||||||||||||| ||||| || || |||||||| || | || || | |||||||| Sbjct 5534009 ACAAGATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGACAACGTACGTCCATCTTCC 5533950 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 ||| || || || ||||| || || |||||||| | | ||||||||||| || || Sbjct 5533949 AGGTGCTTGCCTGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGG 5533890 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || || || | ||||| || || || || || ||||| || || || Sbjct 5533889 ATCTTGGCCTTTACGTTTTCTACTGCATCCGAGGGTTCGACCTCGAGAGTGATGGTCTTC 5533830 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCA 152103 ||||| || ||||||| ||| ||||| Sbjct 5533829 CCCGTCAGGGTCTTCAAGAAAGTCTGCA 5533802 >seq33 Length=16598743 Score = 96.9 bits (106), Expect = 8e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||| | ||| ||||| |||||||| || | | ||| | Sbjct 8627173 AGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCAGACAGAGTACGT 8627114 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||| ||| | || || || ||||| || || || ||||| | | ||||||||| Sbjct 8627113 CCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGAATTCCTTCC 8627054 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || ||| | |||| | || || | || || ||||| Sbjct 8627053 TTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACCTCGAGAGTG 8626994 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| || ||||||||||| | |||||| || Sbjct 8626993 ATGGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCATATT 8626953 >seq10 Length=27321270 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/208 (71%), Gaps = 9/208 (4%) Strand=Plus/Plus Query 151898 AAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG 151957 |||||||||||| ||||| ||||| |||||||| || ||||| | |||||||| | Sbjct 23648173 AAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC----AAAGTACGTCCATCTTCCA- 23648227 Query 151958 GCTT--TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 ||| || || || ||||| || || |||||||| | | ||||||||||| || || Sbjct 23648228 -CTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCTGG 23648286 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || || ||| | ||| | ||||| || ||||||||||| || || | Sbjct 23648287 ATCTTGGCCTTTACATTTTCTGTTGTATCTGAGGGTTCAACTTCAAGAGTGATGGTCAT- 23648345 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCA 152103 ||| || ||||||| ||| | ||||| Sbjct 23648346 CCCTGGAAGGTCTTCATGAAAATCTGCA 23648373 >seq24 Length=21601121 Score = 93.3 bits (102), Expect = 1e-13 Identities = 104/138 (75%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | |||||| || || || ||||||||||| |||||||||||||| | | ||| Sbjct 9816201 CCTTAGACGGAGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAATAGT 9816142 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || ||| || || || || ||||||||||||| || | ||| || Sbjct 9816141 GCGGCCATCTTCCAGCTGTTTGCCTGCAAACATGAGCCTCTGCTGGT-CGGGGGGATGCC 9816083 Query 152003 TTCCTTTTCTTGAATTTT 152020 ||| || || || || || Sbjct 9816082 TTCTTTATCCTGGATCTT 9816065 >seq265 Length=2252016 Score = 84.2 bits (92), Expect = 5e-11 Identities = 146/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 |||||||||||||| ||||| | ||| |||||| || |||| | |||||||| Sbjct 744500 ACAAGATGAAGAGTGGACTCCTCTTGAGTGTTGTGGTCC----AAGTACATCCATCTTCC 744445 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || || ||||| || || |||||||| | | ||||||||||| || || Sbjct 744444 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTGTCCTGG 744385 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || || ||| | ||| | || || || || || ||||| | || || Sbjct 744384 ATCTTGACCTTTACATTTTCTGTCGTATCCGAGGGTTCGACCTCGAGAGTGACGGTCTTC 744325 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || |||||||| || | |||||| || Sbjct 744324 CCCGTCAGGGTCTTCACAAAAATCTGCATATT 744293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153796141407228