Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Orcinus_20orca_20[refseq_20GCF_5F000331955.2_202013-01-31] 1,668 sequences; 2,372,919,875 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq84 136 3e-27 seq20 134 1e-26 seq53 118 8e-22 seq34 118 8e-22 seq33 114 9e-21 seq265 96.9 2e-15 seq85 96.9 2e-15 seq259 91.5 1e-13 >seq84 Length=11797838 Score = 136 bits (150), Expect = 3e-27 Identities = 171/232 (74%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || ||||| || | | |||||||| || ||| ||| || ||||||||||| || Sbjct 5419768 CATCCCACCTCTGAGGCGAAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTC 5419709 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || |||| | || |||||||| |||||||||||||||| | |||||| |||| Sbjct 5419708 AGACAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGG 5419649 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | || || ||||| |||||| ||| | |||| | |||||||| || | Sbjct 5419648 GGGGATGCCCTCTTTTTCTTGGATCTTCCCCTTGAC-GTTCTCGATGGTGTCACTGGGCT 5419590 Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||||||| || || ||||| || || | ||||||||||||||| ||||| Sbjct 5419589 CCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCAT 5419538 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || ||| || || ||||||||||| || | || |||| | || ||| Sbjct 5420804 ACCAGGTGCAGAGTGGATTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCC 5420745 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 ||||| ||||||||||||||||| | |||||| |||| || | || ||||| ||| Sbjct 5420744 AGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 5420685 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | |||||||| || |||||||||| || || ||||| Sbjct 5420684 ATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAAGGTGATGGTCTTG 5420625 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | ||||||||||||||| ||||| Sbjct 5420624 CCAGTCAAGGTCTTCACGAAGATCTGCAT 5420596 Score = 104 bits (114), Expect = 2e-17 Identities = 138/189 (73%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | | |||||||| || || ||| || |||||||||||||| Sbjct 5420598 CATACCACCCCTCAGACGGAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATC 5420539 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || |||||||| |||||||||||||||| | |||||| |||| Sbjct 5420538 AGAAAGAGTGCGGCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGG 5420479 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285 || | |||||||| ||| ||||| |||| | |||| | |||||||| || | Sbjct 5420478 GGGGATGCCTTCCTTATCCTGGATCTTGGCCTTC-ACGTTCTCGATGGTGTCACTGGGCT 5420420 Query 44286 CCACCTCCA 44294 ||||||||| Sbjct 5420419 CCACCTCCA 5420411 >seq20 Length=22150888 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | |||||||| || || ||| || |||||||||||||| | | Sbjct 5019757 CCACCCCTCAGACGAAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAG 5019698 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || |||||||| || || |||||||| | | |||||| |||| || Sbjct 5019697 AGAGTGCGGCCATCTTCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 5019638 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | |||||||| ||| ||||| ||||| |||| | |||||||| || ||||| Sbjct 5019637 ATGCCTTCCTTATCCTGGATCTTGGCCTTCAC-GTTCTCGATGGTGTCACTGGGCTCCAC 5019579 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || ||||| || || ||||||||||||||||| ||||| Sbjct 5019578 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 5019531 >seq53 Length=16102195 Score = 118 bits (130), Expect = 8e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| || ||||| ||| ||||||||| ||||||| || | | || Sbjct 15465285 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTGGTCAGACAAAGTACGT 15465344 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||||||||| || |||||||||| | ||||| || | ||| | ||||| Sbjct 15465345 CCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTACTTCC 15465404 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || || | || || | || ||| ||||| | || Sbjct 15465405 TTGTCCTGGATCTTGGCCTTTATGTTTTCTGTTGTATCCGAGGGTTCGACCTCGAGAGTG 15465464 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||||||||| || ||||| Sbjct 15465465 ATGGTCTTCCCCGTCAGGGTCTTCACGAAAATCTGCAT 15465502 >seq34 Length=14701056 Score = 118 bits (130), Expect = 8e-22 Identities = 158/213 (74%), Gaps = 9/213 (4%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGT-TGGCGCTCGTCG 44185 |||||||| || || ||| || | |||||||||||| | |||| |||| |||| Sbjct 8730390 ACCAGGTGCAGTGTCGACTCTTTCTAGATGTTGTAATCAGAAAGAGTGTGGC---CGTCT 8730334 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 |||||||| || || |||||||| | | |||||| || | || | ||||| || ||| Sbjct 8730333 TCCAGCTGTTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTC-TTATCC 8730275 Query 44246 GTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| ||||| ||||| | |||||||| ||| |||||||||| || | || Sbjct 8730274 TGGATCTTGGCCTTCA-TGTTCTCGATGGTGTCACTGGACTCCACCTCCAGGGTGACAGT 8730216 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || ||||||||||||||||| ||||| Sbjct 8730215 CTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 8730183 >seq33 Length=16598743 Score = 114 bits (126), Expect = 9e-21 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| || ||||| ||| ||||||||| |||||||| || | || || Sbjct 8627173 AGTCTCAACACAAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCAGACAGAGTACGT 8627114 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | | ||| | ||||| || |||||||||| | || || || | ||| | |||||| Sbjct 8627113 CCATTTTCCCGTTGCTTGCCAGCAAAGATCAGTCTTTGGTGGTCAGGAGGAATTCCTTCC 8627054 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || |||| || || | || || ||||| | || Sbjct 8627053 TTGTCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTTGACCTCGAGAGTG 8626994 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||||||||| || ||||| Sbjct 8626993 ATGGTCTTCCCCGTCAGGGTCTTCACGAATATCTGCAT 8626956 >seq265 Length=2252016 Score = 96.9 bits (106), Expect = 2e-15 Identities = 152/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 44122 TCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTC 44181 ||||||||| || ||||| ||| ||||| ||| |||||| || | ||| | | Sbjct 744507 TCTCAACACAAGATGAAGAGTGGACTCCTCTTGAGTGTTGTGGTC--CAAGTA--CATCC 744452 Query 44182 GTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTT 44241 || ||||| ||||| || |||||||||| | ||||| || | ||| | |||||||| Sbjct 744451 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTT 744392 Query 44242 TTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAAT 44301 ||| ||||| ||| | || || | || || | || ||| ||||| | || | Sbjct 744391 GTCCTGGATCTTGACCTTTACATTTTCTGTCGTATCCGAGGGTTCGACCTCGAGAGTGAC 744332 Query 44302 CGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| ||||| ||||||||||| || || ||||| Sbjct 744331 GGTCTTCCCCGTCAGGGTCTTCACAAAAATCTGCAT 744296 >seq85 Length=9129030 Score = 96.9 bits (106), Expect = 2e-15 Identities = 143/196 (73%), Gaps = 9/196 (5%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGC--GAGT-TGGCGCTCGTCGTCCAGCTGCTTCCCGGC 44202 ||| || |||||||||| ||| | |||| |||| | || ||||||||||| || || Sbjct 2104099 CTCTTTCTGGATGTTGTGATCAGAAAGAGTGTGGC---CATCTTCCAGCTGCTTGCCTGC 2104155 Query 44203 AAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA 44262 |||||| || | ||| || || | |||| |||||||| ||| ||||| ||||| Sbjct 2104156 AAAGATGAACCTCTGTTGTTCGGGAGGCTG-CCTTCCTTATCCTGGATCTTGGCCTTCAC 2104214 Query 44263 TGTTCCT-ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCT 44321 ||||| ||| |||| || || ||||||| || || ||||| | | | ||||| Sbjct 2104215 A-TTCCTGATGATGTCACTGGGCTCTACCTCCAGGGTGATGGTCTTGCTGGCCAAGGTCT 2104273 Query 44322 TCACGAAGATTTGCAT 44337 |||||||||||||||| Sbjct 2104274 TCACGAAGATTTGCAT 2104289 >seq259 Length=1197011 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/217 (70%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| | ||||| ||| | ||||||| ||||||| || | || Sbjct 605922 AGTCTCAACACAATATGAAGAGTGGACCCCTTTTGAATGTTGTGGTCAAACAAAGTACGT 605863 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||| ||||| || |||||||||| | |||||| || | | | |||||| Sbjct 605862 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGGTCAGGGGAAATTCCTTCC 605803 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || || | || || | || ||| ||||| | || Sbjct 605802 TTGTCCTGGATCTTAGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTCGAGAGTG 605743 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCA 44336 || ||| |||| || |||||||||||||| || |||| Sbjct 605742 ATGGTC-TTCCTGTCAGGGTCTTCACGAAAATCTGCA 605707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359983081845156